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scnpilot_p_inoc_scaffold_1397_12

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(10144..10707)

Top 3 Functional Annotations

Value Algorithm Source
TraE protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GNF7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 184.0
  • Bit_score: 216
  • Evalue 2.80e-53
TraE protein {ECO:0000313|EMBL:EJL24268.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 184.0
  • Bit_score: 216
  • Evalue 3.90e-53
TraE family protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 187.0
  • Bit_score: 198
  • Evalue 1.70e-48

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGATCTCAATCTCCATCACCGTCAGGCCCAGCAGGTCCTCAAACAACGCAACGCGCTCGCGATCGCCGTGCTGGTGCTCACCGTGCTGCTGGTCGCGACCTTTTCGGTCGCTTCGACGCGCGAGCGCGAGGTCGTGCTGATGCCGATCGGGCGTCAGAGCTTCACGCTCTCCTCCAAGGGCGTGTCGCGCGATTATCTCGAAATGGTGACCCGCGACACGGCGCTGCTCGCACTCAACCGATCGCCCGAAGGCCTGCACTATTGGATGAACAGCCTGCTCGAGATCGCCGACCCGCAAAGCCGGGGCGCGCTCAAGGTCTCGCTGCTCAAGATCTATCAGGAGCAGGCAGGCTCGCAGATTTCTCAGTTTTTCACGCCCGACTGGATGGAAGTCCACCCCGAGACGCTGAGCAGCGAAATCGGCGGCACGGTCCACACGATGGCGGCCAATAAGGAAGTAAGCGTGCAACACCGGACTTTCCGCTTTGCCTGGTCCTACAATGGCATTTCCTTGAAATTGCGCAGCTTTGGCGCTGTGGTCAAAGCCGAGCCCGCGTCGTGA
PROTEIN sequence
Length: 188
MDLNLHHRQAQQVLKQRNALAIAVLVLTVLLVATFSVASTREREVVLMPIGRQSFTLSSKGVSRDYLEMVTRDTALLALNRSPEGLHYWMNSLLEIADPQSRGALKVSLLKIYQEQAGSQISQFFTPDWMEVHPETLSSEIGGTVHTMAANKEVSVQHRTFRFAWSYNGISLKLRSFGAVVKAEPAS*