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scnpilot_p_inoc_scaffold_3001_4

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(6771..8003)

Top 3 Functional Annotations

Value Algorithm Source
Cation efflux system protein CusB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZWE2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 410.0
  • Bit_score: 638
  • Evalue 4.90e-180
  • rbh
Cation efflux system protein CusB {ECO:0000313|EMBL:GAD49699.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 410.0
  • Bit_score: 638
  • Evalue 6.90e-180
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 406.0
  • Bit_score: 545
  • Evalue 1.60e-152

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGAACTGGCACGCGAAGCAGACCGCGCGTTGGGGCGCAGGCATCTTGGCGATCGCCCTGGCGGCAGGCGCGGGCGGGTATTGGCTCGGTCATAGCAGCAGTCCCGGTACCGTGACGGGCGCCGGATCGGAGCGCAAGATCCTTTACTGGTACGATCCGATGGTACCCGCCGAGCACTACGACAACCCCAATTCACTGTCGTCGATGGGGATGAAAACCATCCCAAAATATGCCGACGAAGGGGCTGCAACCGCCACGGCCCCGGGGGTCAGCATCGACCCGGCTGTCCGGCAGAGCCTTGGCCTGCGTGTGGTCACGGCGGAGATTGGCACACTGCCTTCATCGGTCACGGTCACCGGCACGATCGACTTCAACCAGCGCAATGTCGCCATCATCCAGGCGCGCTCGGGCGGTTTTATCACCCGTGTCTATGGCAGGGCGCCGGGCGACGTTATCGGTGCGGGCGAGCCCATAGCGGACCTGCAATTGCCCGAATGGGGCGGCGCGCAGGGCGAGTATCTCGCGGTCCGCCGCCTTGGCCGCCCCGACCTTACCGCGGCGGCACGCCAGCGGCTGAGGTTACTGGGCATGCCCGAGCAGCTCATCGGGCAAGTGGAGCGCAGCGGGCGAACGAGCGCCGTTCTTACCATCACGTCGCCAATCGGCGGGGTCATCCAGACGCTTGATGGACGGCAGGGAATGACGCTCGTGGCAGGCCAGACCCTTGCACAGGTCAACGGGATCGGAACGGTCTGGGTCAATGCCGCCGTGCCGCAGGCGCAGGCGGGCCTTGTTCGGGTCGGGCAGCGCGCAAACGTGACGCTGGCCGCTCTTCCCGGCCAAAACCTCGCGGGCCGCGTGATTGCGATCCTGCCGACAGCGCAGGCCGAAAGCCGGACTCTCACGGTGCGGATCGAACTGGCCAACAGCGGCAGCCTGCTGCGCCCCGGCATGTTCGCCACCGTGGCGCTCGGCGACGAAGGCCAACCCGGATTGTTGGTGCCGAGCGAGGCGGTCATCCGCACCGGCGCGCGCAATCTCGTCATTCTTGCCCTCGCCGACGGACGCTATCGGCCAGCGGAGGTCCGGCTTGGCCGCGAGGGCGGGGGCAGAACAGAAATCCTTACCGGGCTTGCGCCAGGCGAGAAGGTGGCGGCATCGGGGCAGTTCCTGCTTGATTCCGAAGCAAGCCTGAGCGGTGTTCCGGCACGGCCGATCGGAGATGTGCGATGA
PROTEIN sequence
Length: 411
MNWHAKQTARWGAGILAIALAAGAGGYWLGHSSSPGTVTGAGSERKILYWYDPMVPAEHYDNPNSLSSMGMKTIPKYADEGAATATAPGVSIDPAVRQSLGLRVVTAEIGTLPSSVTVTGTIDFNQRNVAIIQARSGGFITRVYGRAPGDVIGAGEPIADLQLPEWGGAQGEYLAVRRLGRPDLTAAARQRLRLLGMPEQLIGQVERSGRTSAVLTITSPIGGVIQTLDGRQGMTLVAGQTLAQVNGIGTVWVNAAVPQAQAGLVRVGQRANVTLAALPGQNLAGRVIAILPTAQAESRTLTVRIELANSGSLLRPGMFATVALGDEGQPGLLVPSEAVIRTGARNLVILALADGRYRPAEVRLGREGGGRTEILTGLAPGEKVAASGQFLLDSEASLSGVPARPIGDVR*