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scnpilot_p_inoc_scaffold_5284_8

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 4403..4792

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein PilT n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6A071 similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 129.0
  • Bit_score: 201
  • Evalue 4.90e-49
Uncharacterized protein {ECO:0000313|EMBL:CCW15949.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 129.0
  • Bit_score: 199
  • Evalue 2.60e-48
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 129.0
  • Bit_score: 197
  • Evalue 2.60e-48

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGAGCGAAGTCGTCCTTGATGCGTCGGCACTACTGGCCTTGCTGAATGACGAGCCCGGAGCTGCCAAAGTCGCTGAGGCCTTGGGCGCGTCACGGATGTTGTCGGTCAATCTGGCCGAGGTTGTAAGCCATTTCGTCCATGCTGGCATGCCGCATGGCGAAGTCGACGCGATGTTGCGCCCGCTCCCGATGCAGATCGTGCCGGCTGACGAGGGCCTCGCCCATATCGCCGGACGTTTGCGTGCAGTGACTGCCTCGGCCGGGCTATCGCTCGGCGATCGGTTCTGCCTCGCGCTTGCGCAACGCGACGGTTTGCCGGCGATGACCGCCGACAAGCAGTGGCGGACGGTATCCGATGCAGTCGACGCCAAGGTCATCGTCATCCGCTAG
PROTEIN sequence
Length: 130
MSEVVLDASALLALLNDEPGAAKVAEALGASRMLSVNLAEVVSHFVHAGMPHGEVDAMLRPLPMQIVPADEGLAHIAGRLRAVTASAGLSLGDRFCLALAQRDGLPAMTADKQWRTVSDAVDAKVIVIR*