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scnpilot_p_inoc_scaffold_10021_6

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2678..3100)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 141.0
  • Bit_score: 188
  • Evalue 8.50e-45
Ribonuclease VapC n=1 Tax=gamma proteobacterium HdN1 RepID=E1VKV0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 141.0
  • Bit_score: 188
  • Evalue 6.10e-45
vapC4; nucleic acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 141.0
  • Bit_score: 188
  • Evalue 1.70e-45

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Taxonomy

gamma proteobacterium HdN1 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGATTATTCTTGATACGAACGTCATTTCGGAAATGATGAAGCCCGATCCCGCAGAGAGTGTACGGCGCTGGCTTGACGATCAGCTAGCGGAGGTTCTGTTTCTCACATCGGTTAGCCAAGCCGAGTTGCTGTTTGGTATCGCCATGCTTCCGGCCGGTCGTCGTAAGGAGAATCTCGGTGCTGTGCTCACCGGCCTTGAGCCGCTGTTTGCCGGACGCATTCTGCCTTTCGATAGCGATGCCGCGCAGCATTATGCGCATTCGGCGGTAGAAGTCGAGAACAGCGGCAGGGACTTTCCAACACCAAATGGCTACATTGCCGCTATAGCCGCATCGAAGGGCTTTGCTGTTGCCACGCGCGATGTTGCCCCCTTTGAGGCTGGCGGTGTGGCTGTTATCAATCCTTGGGAGGCTGGGGAATGA
PROTEIN sequence
Length: 141
MIILDTNVISEMMKPDPAESVRRWLDDQLAEVLFLTSVSQAELLFGIAMLPAGRRKENLGAVLTGLEPLFAGRILPFDSDAAQHYAHSAVEVENSGRDFPTPNGYIAAIAASKGFAVATRDVAPFEAGGVAVINPWEAGE*