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scnpilot_p_inoc_scaffold_52418_1

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3..665)

Top 3 Functional Annotations

Value Algorithm Source
TraF-like protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 210.0
  • Bit_score: 393
  • Evalue 1.90e-106
  • rbh
TraF-like protein {ECO:0000313|EMBL:EGD60463.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ni similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 210.0
  • Bit_score: 393
  • Evalue 2.70e-106
conjugal transfer protein TraF similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 161.0
  • Bit_score: 214
  • Evalue 2.70e-53

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGCGCCAAGCCTCACGCCCTTTAGCCGCCACGCTGATCGCCTTGCTGACCAGCGCAAGCCTCGTCACCGCCAGTCCGCTGATGGCCTTGGGAACCCCTCCGGCCAGCGCCGCGCTGGAACAAGAGGACATGTCCAATCGTGAGAACGTGGACCCGTCCACGAGTGGGCAAGTGGACAGGTCCACTGGTGAACATGTGGACACGTCCACAGTTGCCGGTGATCCCTTCTATTGCGGCGAGCGCAAACTCGGCACCTGGTTCTACTGCGAGCGCCCCAAGCCCAAGACGTCCGATCCCAGCGCTTCGGCCAGTGCCGCATCGCCCAGCTACCGCCAGCAACTCAACAAGATCGGCGCGCGGCTTGAGGAGCTGAAAGCCAAGGCGATCCTCGAGCCGACCTCGGACAACATCATCGCCTATGTCCGCTACCAGCGCGAACAGCTCGACCGCGCTTCGACCTTTGCCGATGTGTGGGAGCGCGCCATCTGGCAGCACGCCGATCTCGACTACACGCTTCAGCGGCCGGTCAGCACGCTGGGCAAGACCGCTTGGCTTGCCCAGCGCAAGACTGACCGGGAGGCCGTGATTGCCTCGCTGTCGGAACGCTACGGCCTGTTCTTCTTCTACTCCACGAGTTGCGCGGCCTGCGAGGTTTTCTCGCCC
PROTEIN sequence
Length: 221
MRQASRPLAATLIALLTSASLVTASPLMALGTPPASAALEQEDMSNRENVDPSTSGQVDRSTGEHVDTSTVAGDPFYCGERKLGTWFYCERPKPKTSDPSASASAASPSYRQQLNKIGARLEELKAKAILEPTSDNIIAYVRYQREQLDRASTFADVWERAIWQHADLDYTLQRPVSTLGKTAWLAQRKTDREAVIASLSERYGLFFFYSTSCAACEVFSP