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This organism can only be binned in the context of its binning project RIFCSPLOWO2_01_FULL. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

scnpilot_p_inoc_scaffold_65720_1

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 1..534

Top 3 Functional Annotations

Value Algorithm Source
YeeB-like protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4K4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 342
  • Evalue 2.40e-91
YeeB-like protein {ECO:0000313|EMBL:EGD60474.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ni similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 342
  • Evalue 3.40e-91
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 177.0
  • Bit_score: 301
  • Evalue 1.30e-79

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GGGATGTTTGACACCGAAGTGGTACCCGAGGAGCTGACCCAGCTGAAGATGGGCAAGATCATCCGCGAGAAATTCCCTGACCTCAGCGAAGATGACCAGGAAGCGGTTCGTCAGCACGCCATTGCCGCCCTGACACTGACCCAGCAGGCCAAGGCCGCCATGGTCGGCGATGTGGTCGATGGGGAGTTTTCGGGCAGTACAGCTTTCATCGATGGGGTGCGCAAATTTGCCCTGAGCGTTACCGACCTCGACATCGATCTGATCGACCGCGTCAATCCGTTTGACGCCACCTATGCCGTGCTGGCCAAGGCGATGGACGAGAAGACCCTGTTGCAGGTGCAGGCTGTCATCAACGCCAAGAAGGACAAGCTGACCTACGAGGATGCGCGGATGCTGGCCGAGCGCGCGCTCGAGTTCAAGCGGGAGCGCGGGCGCCTTCCCTCGCTGACCTCGCAGGATGCCTGGGAGCGCAAGATGGCCGAGGGCATCGCCTTCCTGCAACGTCATGCGGCAAAGGCGGCGGCTGATGGCTGA
PROTEIN sequence
Length: 178
GMFDTEVVPEELTQLKMGKIIREKFPDLSEDDQEAVRQHAIAALTLTQQAKAAMVGDVVDGEFSGSTAFIDGVRKFALSVTDLDIDLIDRVNPFDATYAVLAKAMDEKTLLQVQAVINAKKDKLTYEDARMLAERALEFKRERGRLPSLTSQDAWERKMAEGIAFLQRHAAKAAADG*