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scnpilot_p_inoc_scaffold_4373_6

Organism: SCNpilot_P_inoc_Mobile_elements_general

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 2991..3458

Top 3 Functional Annotations

Value Algorithm Source
17 kDa surface antigen n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12C57_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 181.0
  • Bit_score: 105
  • Evalue 5.70e-20
Glycine zipper 2TM domain containing protein {ECO:0000313|EMBL:KIF80986.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 161.0
  • Bit_score: 116
  • Evalue 3.50e-23
rickettsia 17 kDa surface antigen family protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 167.0
  • Bit_score: 106
  • Evalue 9.40e-21

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGAAGAAAACCGCCGTATTGCTGATGCTGGCCGTGAGCGCTACAGCGCAGGCCGCATCGTTCGAAGACACCGCGCGCGTGTTGTCGGTCGAAGAAAAAACCAGCCAGTCCACCCAGCGCCGCCAAGTCTGCGAAGACGTTCAGAGCACATCGACCATGCCCGGCGTGGGCACGGTCATTGGCGCGGTCGCCGGGGGCGTTCTTGGGGCACAGGTAGGGAAAGGCAACGGACGAACGGCGGCAGCAGCTACCGGGGCTGTCGTGGGCGCACTGACCGGCAATCACCTTGAAAAAGGCGGCAACGCCGGGCGCAACTGCTATGCGGCCAATGAATACGAGACGCGCGTTATCGGGTACACCGTGACCTATGACTACAACGGGCGCGTGTTCACACAGTTCATGCCAACCGCGCCGAGTGGCGACACCCTCAAGGTGCGGGTCAACCTGACAGCTTCGGCAGGACGTTGA
PROTEIN sequence
Length: 156
MKKTAVLLMLAVSATAQAASFEDTARVLSVEEKTSQSTQRRQVCEDVQSTSTMPGVGTVIGAVAGGVLGAQVGKGNGRTAAAATGAVVGALTGNHLEKGGNAGRNCYAANEYETRVIGYTVTYDYNGRVFTQFMPTAPSGDTLKVRVNLTASAGR*