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scnpilot_p_inoc_scaffold_429

Search features with annotation key words

Displaying items 91-118 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_429_91
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99581..100483)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B62867 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI95236.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
scnpilot_p_inoc_scaffold_429_92
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100545..100994)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036A25FC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98250.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_p_inoc_scaffold_429_93
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101022..101270)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIE8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88988.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_429_94
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101290..102501)
DNA (1212bp) protein (404aa)
Phage-related dna-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIE7_9BURK
Phage-related dna-binding protein {ECO:0000313|EMBL:EIK88987.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogen
DNA-binding protein
scnpilot_p_inoc_scaffold_429_95
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102498..103151)
DNA (654bp) protein (218aa)
Phage-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIE6_9BURK
Phage-like protein {ECO:0000313|EMBL:EIK88986.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.
hypothetical protein
scnpilot_p_inoc_scaffold_429_96
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103324..103767)
DNA (444bp) protein (148aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48010.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Uncharacterized protein id=4201467 bin=GWC2_Deltaproteobacteria_55_46 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
scnpilot_p_inoc_scaffold_429_97
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103944..104426
DNA (483bp) protein (161aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP49433.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
type IV secretory pathway protease TraF-like protein; K12062 conjugal transfer pilin signal peptidase TrbI id=12497072 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_429_98
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104452..104769
DNA (318bp) protein (106aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48011.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_99
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104773..106806
DNA (2034bp) protein (678aa)
Relaxase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEK0_GALCS rbh
Integrating conjugative element relaxase, PFGI-1 class {ECO:0000313|EMBL:EXI84463.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidat
relaxase
scnpilot_p_inoc_scaffold_429_100
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106819..107766
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SES1_GALCS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL55018.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferr
scnpilot_p_inoc_scaffold_429_101
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107998..109473)
DNA (1476bp) protein (492aa)
Transcriptional regulator, XRE family n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K6G2_PSEPS rbh
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDR92701.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleov
scnpilot_p_inoc_scaffold_429_102
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109791..110414
DNA (624bp) protein (208aa)
Type-F conjugative transfer system protein TraW n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEJ9_GALCS
conjugal transfer protein TraW rbh
Conjugal transfer protein TraW {ECO:0000313|EMBL:AJP48012.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1
scnpilot_p_inoc_scaffold_429_103
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110398..111414
DNA (1017bp) protein (339aa)
TraU family protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEJ8_GALCS rbh
conjugal transfer protein rbh
Conjugal transfer protein {ECO:0000313|EMBL:AJP48013.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.
scnpilot_p_inoc_scaffold_429_104
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111419..112120
DNA (702bp) protein (234aa)
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEJ7_GALCS
Conjugal transfer pilus assembly protein TrbC {ECO:0000313|EMBL:EXI90127.1}; Flags: Precursor;; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source
type-F conjugative transfer system pilin assembly protein TrbC
scnpilot_p_inoc_scaffold_429_105
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112150..113316
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEJ6_GALCS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP48014.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_106
unknown

Not on your lists

comp(113334..113753)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_429_107
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114525..115397
DNA (873bp) protein (291aa)
Conjugal transfer mating pair stabilization protein TraN n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VRC6_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48015.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_108
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115394..115810
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DML0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48016.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_109
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115852..116142
DNA (291bp) protein (97aa)
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00035E94EA
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJP48017.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_110
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116269..116505
DNA (237bp) protein (79aa)
Helix-turn-helix domain protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SES9_GALCS
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJP48018.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_111
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116502..117860
DNA (1359bp) protein (453aa)
HipA N-terminal domain protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SET0_GALCS rbh
phosphatidylinositol kinase rbh
Phosphatidylinositol kinase {ECO:0000313|EMBL:AJP48019.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca
scnpilot_p_inoc_scaffold_429_112
unknown

Not on your lists

comp(117877..118080)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_429_113
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118169..118480)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XEN2_METSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP48020.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_114
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118763..119671
DNA (909bp) protein (303aa)
DNA polymerase III, epsilon subunit n=1 Tax=Azoarcus sp. KH32C RepID=H0Q173_9RHOO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP48021.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_p_inoc_scaffold_429_115
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119766..120434
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036124E0
Uncharacterized protein {ECO:0000313|EMBL:GAO33431.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amni
hypothetical protein
scnpilot_p_inoc_scaffold_429_116
unknown

Not on your lists

120669..120776
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_429_117
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120987..121649
DNA (663bp) protein (221aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VS63_POLNA
scnpilot_p_inoc_scaffold_429_118
Prochlorococcus marinus, Prochlorococcus, Prochlorales, Cyanobacteria, Bacteria

Not on your lists

121649..122800
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus (strain MIT 9312) RepID=Q31AA2_PROM9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB50193.1}; TaxID=74546 species="Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.;" source="Prochlorococcus marinus (strain MIT 93
Displaying items 91-118 of 118 in total

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