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scnpilot_p_inoc_scaffold_1650_18

Organism: scnpilot_dereplicated_Plasmid_Betaproteobacteria_4

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(17247..17957)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z35_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 227.0
  • Bit_score: 233
  • Evalue 1.60e-58
lipopolysaccharide biosynthesis Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 231.0
  • Bit_score: 245
  • Evalue 5.80e-62
lipopolysaccharide biosynthesis similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 227.0
  • Bit_score: 233
  • Evalue 4.60e-59

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Taxonomy

R_Betaproteobacteria_62_17 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCGAACGCCTATGTCGAAGAGCTCTCCTCGCTGACCGGCCGCCTGGCGGTGACCGAAGCGCAGAAGCGCCGACGATTTCTCGAAAAAGAGTTGGCCAAGGCCAAAGAGAATCTGGTCAAGGCCGAAATCGCCCTGGGCGGCGCCGGCGTCAGCGAAGACACGCTGAAGTTCAACCCCGCAGTCATGGGCCAAGGCCTCGCCACCCTCAAGGCGCAAATCATGGCCAAGGAACTGCAGCTATCCAGCATGCGCGGTGTTCTTACCGAGAACAGCCCGAATTTTCGCCAGGCCCAGCAAGAATTGGCGGCGCTGCGCGCGCAACTGGGCAAGTTCCAAAATACCCGCCCCAACGGAGATAATGCCGAATACATCAGCCGCTACCGCGACTTCAAATACAACGAAGTGCTGTTCGAACAGCTCTCCAAGCAATACGAACTGGCCAAAATAGACGAGTCCAGCGATGGCGCAGTAATCCAGGTGGTGGATGTGGCGGTGCCGCCGGAGCGCAAGTCCAATACCCCAAAATCGAAGACTGCCACTCTGGCTGCGCTGGCCGCCGGCTTTGTGTTGCTGGTATTCGTGTTTGTTCGCCGTGCCCTGAAAAACGCCAACCAGAACCCTGAAAATACGGCCAAGTTCGCGGCCATCCGTGCCGGCTTTTTGCGGGTGCTGATGCCCTGGCGCCGAAGTGCCAAGGCAGGCCGGTAA
PROTEIN sequence
Length: 237
MANAYVEELSSLTGRLAVTEAQKRRRFLEKELAKAKENLVKAEIALGGAGVSEDTLKFNPAVMGQGLATLKAQIMAKELQLSSMRGVLTENSPNFRQAQQELAALRAQLGKFQNTRPNGDNAEYISRYRDFKYNEVLFEQLSKQYELAKIDESSDGAVIQVVDVAVPPERKSNTPKSKTATLAALAAGFVLLVFVFVRRALKNANQNPENTAKFAAIRAGFLRVLMPWRRSAKAGR*