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scnpilot_p_inoc_scaffold_30

Search features with annotation key words

Displaying items 301-330 of 506 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_30_301
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(318543..319454)
DNA (912bp) protein (304aa)
ABC transporter related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICL5_FLUTR rbh
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:AEA42242.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffens
scnpilot_p_inoc_scaffold_30_302
Sulfurospirillum deleyianum, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(319451..320029)
DNA (579bp) protein (193aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) RepID=D1B1N2_SULD5
nicotinamide mononucleotide transporter PnuC
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:ACZ12002.1}; TaxID=525898 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirill
scnpilot_p_inoc_scaffold_30_303
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

320080..320913
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC75_FLUTR
hypothetical protein; K06203 CysZ protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_30_304
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(320999..321688)
DNA (690bp) protein (230aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICD2_FLUTR
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_30_305
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(321681..322754)
DNA (1074bp) protein (358aa)
Ferredoxin n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICD3_FLUTR rbh
ferredoxin Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
ferredoxin
scnpilot_p_inoc_scaffold_30_306
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(322762..323847)
DNA (1086bp) protein (362aa)
phenylacetate-CoA oxygenase/reductase subunit PaaK (EC:1.14.12.17); K02613 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
phenylacetate-CoA oxygenase/reductase subunit PaaK (EC:1.14.12.17)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICD4_FLUTR rbh
scnpilot_p_inoc_scaffold_30_307
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(323889..324743)
DNA (855bp) protein (285aa)
Uncharacterized protein id=4319371 bin=GWF2_Bacteroidetes_42_66 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
scnpilot_p_inoc_scaffold_30_308
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

324878..325294
DNA (417bp) protein (139aa)
Nucleoid-associated protein Cpin_0831 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJY8_CHIPD
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_p_inoc_scaffold_30_309
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

325329..325871
DNA (543bp) protein (181aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BLK8_9BACT
scnpilot_p_inoc_scaffold_30_310
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

325997..326572
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAJ7_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_30_311
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(326737..328635)
DNA (1899bp) protein (633aa)
Glucomannan 4-beta-mannosyltransferase (EC:2.4.1.32) Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Glucomannan 4-beta-mannosyltransferase (EC:2.4.1.32)
Glucomannan 4-beta-mannosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAI8_FLUTR rbh
scnpilot_p_inoc_scaffold_30_312
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(328714..329430)
DNA (717bp) protein (239aa)
iron ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=GWF2_Bacteroidetes_33_38_curated
ATP-binding protein of ferrichrome ABC transporter id=4263662 bin=GWF2_Bacteroidetes_33_38 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
iron ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_30_313
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(329427..330371)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000369E610
transport system permease; K02015 iron complex transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
ABC-type Fe3+-siderophore transport system, permease component
scnpilot_p_inoc_scaffold_30_314
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(330368..331444)
DNA (1077bp) protein (359aa)
hypothetical protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Periplasmic binding protein id=1856467 bin=GWD2_Bacteroidetes_33_33 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
Fe3+-hydroxamate ABC transporter periplasmic protein
scnpilot_p_inoc_scaffold_30_315
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(331811..332308)
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC63030.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
scnpilot_p_inoc_scaffold_30_316
Prevotella intermedia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(332336..334216)
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Oxytricha trifallax RepID=J9IL71_9SPIT
Phosphatidylinositol-4-phosphate 5-kinase {ECO:0000313|EMBL:KJJ87051.1}; TaxID=1347790 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella in
MORN repeat protein
scnpilot_p_inoc_scaffold_30_317
unknown

Not on your lists

comp(334273..335604)
DNA (1332bp) protein (444aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_30_318
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

335802..336578
DNA (777bp) protein (259aa)
Transcriptional regulator, LuxR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA50_FLUTR
LuxR family transcriptional regulator
Tax=BJP_IG2102_Flavobacteriales_34_12
scnpilot_p_inoc_scaffold_30_319
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(336604..338241)
DNA (1638bp) protein (546aa)
ATP-binding cassette, subfamily F, member 3 n=2 Tax=Myroides odoratimimus RepID=S3XKT3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHO13985.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP
ATP-binding cassette, subfamily F, member 3
scnpilot_p_inoc_scaffold_30_320
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

338453..339391
DNA (939bp) protein (313aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICS5_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_30_321
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

339378..339977
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RDN4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CCF99145.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_30_322
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

340050..341609
DNA (1560bp) protein (520aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDM4_FLUTR rbh
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_30_323
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

341612..342301
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDM3_FLUTR rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA43396.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
scnpilot_p_inoc_scaffold_30_324
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(342374..344254)
DNA (1881bp) protein (627aa)
prpE; propionate--CoA ligase (EC:6.2.1.17)
Propionate--CoA ligase {ECO:0000313|EMBL:CCB69849.1}; EC=6.2.1.17 {ECO:0000313|EMBL:CCB69849.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; F
Propionate--CoA ligase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z1R5_FLABF
scnpilot_p_inoc_scaffold_30_325
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

344405..344827
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DMR1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP97766.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
transposase
scnpilot_p_inoc_scaffold_30_326
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

344956..346275
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHD9_FLUTR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42694.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviic
scnpilot_p_inoc_scaffold_30_327
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

346301..347815
DNA (1515bp) protein (505aa)
MFS transporter n=1 Tax=Pedobacter agri RepID=UPI00029A1616 rbh
MFS transporter {ECO:0000313|EMBL:ETZ19413.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_30_328
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

347834..348085
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXB1_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06417.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_p_inoc_scaffold_30_329
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

348337..351030
DNA (2694bp) protein (898aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviic
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHD7_FLUTR rbh
integral membrane sensor signal transduction histidine kinase rbh
scnpilot_p_inoc_scaffold_30_330
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

351027..351398
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHD6_FLUTR
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEA42691.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taf
Displaying items 301-330 of 506 in total

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