ggKbase home page

scnpilot_p_inoc_scaffold_61

Search features with annotation key words

Displaying items 61-90 of 260 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_61_61
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

52988..54889
DNA (1902bp) protein (634aa)
DoxX family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G1_FLUTR rbh
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEA45142.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain D
scnpilot_p_inoc_scaffold_61_62
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

54886..55635
DNA (750bp) protein (250aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G2_FLUTR
scnpilot_p_inoc_scaffold_61_63
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

55635..56474
DNA (840bp) protein (280aa)
ribosomal L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Ribosomal L11 methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G3_FLUTR
ribosomal L11 methyltransferase
scnpilot_p_inoc_scaffold_61_64
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

56516..61126
DNA (4611bp) protein (1537aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G4_FLUTR rbh
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_61_65
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

61126..61752
DNA (627bp) protein (209aa)
glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G5_FLUTR
glycerol-3-phosphate acyltransferase
scnpilot_p_inoc_scaffold_61_66
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

61788..68288
DNA (6501bp) protein (2167aa)
WD40-like beta Propeller containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G6_FLUTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS05086.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
scnpilot_p_inoc_scaffold_61_67
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

68342..68611
DNA (270bp) protein (90aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9G7_FLUTR
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:AEA45148.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fl
scnpilot_p_inoc_scaffold_61_68
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

69122..69595
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XR59_FLAIG
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_61_69
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69600..71423
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08T72_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU63677.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
hypothetical protein
scnpilot_p_inoc_scaffold_61_70
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71681..73405
DNA (1725bp) protein (575aa)
Two-component system sensor histidine kinase (EC:2.7.13.3)
Histidine kinase family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EGJ6_9FLAO
Histidine kinase family protein {ECO:0000313|EMBL:EGV42441.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argenti
scnpilot_p_inoc_scaffold_61_71
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

73415..74056
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI0003761550
response regulator of the LytR/AlgR family Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
two-component system-response regulator
scnpilot_p_inoc_scaffold_61_72
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


74351..74914
DNA (564bp) protein (188aa)
30S ribosomal protein S16 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHY6_FLUTR
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
scnpilot_p_inoc_scaffold_61_73
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

74934..75464
DNA (531bp) protein (177aa)
Ribosome maturation factor RimM n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHY7_FLUTR
Ribosome maturation factor rimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Ribosome maturation factor rimM
scnpilot_p_inoc_scaffold_61_74
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

75516..76178
DNA (663bp) protein (221aa)
methyltransferase small; K15460 tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHY8_FLUTR
methyltransferase small
scnpilot_p_inoc_scaffold_61_75
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

76264..76560
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIA5_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51180.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
scnpilot_p_inoc_scaffold_61_76
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

76560..77285
DNA (726bp) protein (242aa)
2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Probable 2-phosphosulfolactate phosphatase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFA6_FLUTR rbh
2-phosphosulfolactate phosphatase
scnpilot_p_inoc_scaffold_61_77
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

77386..78282
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFA5_FLUTR rbh
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_61_78
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(78654..80720)
DNA (2067bp) protein (689aa)
UvrABC system protein B n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFA9_FLUTR rbh
UvrABC system protein B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
scnpilot_p_inoc_scaffold_61_79
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

81041..85348
DNA (4308bp) protein (1436aa)
gliding motility-like protein (EC:3.2.1.-) Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N8W8_9BACT
hypothetical protein
scnpilot_p_inoc_scaffold_61_80
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

85567..85977
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037688D4
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EFK36950.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Ch
ywnA; Rrf2 family transcriptional regulator
scnpilot_p_inoc_scaffold_61_81
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

86033..86887
DNA (855bp) protein (285aa)
Male sterility domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7X4_PEDSD rbh
NAD(P)H:quinone oxidoreductase {ECO:0000313|EMBL:CDS95862.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphi
Male sterility domain-containing protein
scnpilot_p_inoc_scaffold_61_82
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

86986..87405
DNA (420bp) protein (140aa)
Phenylacetic acid degradation-related protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICR1_FLUTR
phenylacetic acid degradation-like protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
phenylacetic acid degradation-like protein
scnpilot_p_inoc_scaffold_61_83
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

87366..88370
DNA (1005bp) protein (335aa)
Chorismate-binding domain-containing protein; K02361 isochorismate synthase [EC:5.4.4.2] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Chorismate binding domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICR0_FLUTR
Chorismate-binding domain-containing protein
scnpilot_p_inoc_scaffold_61_84
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(88406..88663)
DNA (258bp) protein (86aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_61_85
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

88797..89243
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBQ9_FLUTR
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEA45385.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola
scnpilot_p_inoc_scaffold_61_86
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89245..91665
DNA (2421bp) protein (807aa)
TonB-dependent receptor n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBR0_FLUTR rbh
TonB-dependent receptor Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
TonB-dependent receptor
scnpilot_p_inoc_scaffold_61_87
unknown

Not on your lists

comp(91662..91826)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_61_88
unknown

Not on your lists

comp(92261..93121)
DNA (861bp) protein (287aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_61_89
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(93154..95784)
DNA (2631bp) protein (877aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IC97_FLUTR rbh
scnpilot_p_inoc_scaffold_61_90
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(95929..97983)
DNA (2055bp) protein (685aa)
OmpA/MotB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFE6_FLUTR
OmpA/MotB domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
OmpA/MotB domain-containing protein
Displaying items 61-90 of 260 in total

View Taxonomy