ggKbase home page

scnpilot_p_inoc_scaffold_246

Search features with annotation key words

Displaying items 61-90 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_246_61
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

76426..77223
DNA (798bp) protein (266aa)
PASTA domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C5_FLUTR
PASTA domain-containing protein
PASTA domain containing protein {ECO:0000313|EMBL:AEA44082.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffens
scnpilot_p_inoc_scaffold_246_62
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

77223..79478
DNA (2256bp) protein (752aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C6_FLUTR rbh
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_246_63
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

79485..80429
DNA (945bp) protein (315aa)
riboflavin biosynthesis protein RibF (EC:2.7.7.2 2.7.1.26); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Riboflavin biosynthesis protein RibF n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEG4_PEDSD
riboflavin biosynthesis protein RibF
scnpilot_p_inoc_scaffold_246_64
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

80380..80961
DNA (582bp) protein (194aa)
Leucine-rich repeat-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9C3_FLUTR
leucine-rich repeat-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
leucine-rich repeat-containing protein
scnpilot_p_inoc_scaffold_246_65
uncultured Flavobacteriia bacterium, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(80968..82674)
DNA (1707bp) protein (569aa)
Membrane protein containing DUF214 n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RGB9_9BACT rbh
Membrane protein containing DUF214 {ECO:0000313|EMBL:CCG00080.1}; TaxID=212695 species="Bacteria; Bacteroidetes; Flavobacteriia; environmental samples.;" source="uncultured Flavobacteriia bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_246_66
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

82685..83857
DNA (1173bp) protein (391aa)
Uncharacterized conserved protein UCP016719 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKC2_FLUTR rbh
hypothetical protein
Uncharacterized conserved protein UCP016719 {ECO:0000313|EMBL:AEA44025.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluvii
scnpilot_p_inoc_scaffold_246_67
unknown

Not on your lists

83868..85235
DNA (1368bp) protein (456aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_246_68
unknown

Not on your lists

85242..85532
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_246_69
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(85566..86045)
DNA (480bp) protein (160aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKB9_FLUTR
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
scnpilot_p_inoc_scaffold_246_70
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(86119..87111)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C8I3_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ39926.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 195
hypothetical protein
scnpilot_p_inoc_scaffold_246_71
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(87134..88279)
DNA (1146bp) protein (382aa)
5-(carboxyamino)imidazole ribonucleotide synthase (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
5-(carboxyamino)imidazole ribonucleotide synthase (EC:4.1.1.21)
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKA9_FLUTR rbh
scnpilot_p_inoc_scaffold_246_72
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

88491..89333
DNA (843bp) protein (281aa)
transketolase (EC:2.2.1.1)
Transketolase {ECO:0000313|EMBL:AEA45284.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AEA45284.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" s
Transketolase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAW0_FLUTR rbh
scnpilot_p_inoc_scaffold_246_73
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

89341..90696
DNA (1356bp) protein (452aa)
von Willebrand factor type A n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAV9_FLUTR rbh
von Willebrand factor A
von Willebrand factor type A {ECO:0000313|EMBL:AEA45283.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fl
scnpilot_p_inoc_scaffold_246_74
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

90699..91655
DNA (957bp) protein (319aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAV8_FLUTR rbh
scnpilot_p_inoc_scaffold_246_75
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

91753..93087
DNA (1335bp) protein (445aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAY5_FLUTR rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEA45309.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorpha
scnpilot_p_inoc_scaffold_246_76
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

93092..94282
DNA (1191bp) protein (397aa)
acetylornithine transaminase (EC:2.6.1.11) Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
acetylornithine transaminase (EC:2.6.1.11)
hypothetical protein n=1 Tax=Vitreoscilla stercoraria RepID=UPI00036E42B2 rbh
scnpilot_p_inoc_scaffold_246_77
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

94360..94749
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R085_OWEHD
hypothetical protein Tax=CG_Flavo_02
hypothetical protein
scnpilot_p_inoc_scaffold_246_78
Clostridium sp. CAG:762, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94752..95081
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:762 RepID=R5TI85_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262837 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7
scnpilot_p_inoc_scaffold_246_79
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

95071..95766
DNA (696bp) protein (232aa)
acireductone synthase (EC:3.1.3.77)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=
Enolase-phosphatase E1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9F0_FLUTR
scnpilot_p_inoc_scaffold_246_80
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

95766..96848
DNA (1083bp) protein (361aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9V0_FLUTR rbh
scnpilot_p_inoc_scaffold_246_81
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(96970..99648)
DNA (2679bp) protein (893aa)
cell wall surface anchor family protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PKD domain protein id=4480300 bin=GWF2_Bacteroidetes_43_63 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
PKD domain-containing protein
scnpilot_p_inoc_scaffold_246_82
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

99744..100928
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6ZSZ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD33572.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
scnpilot_p_inoc_scaffold_246_83
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

100891..101157
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9X3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44131.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
scnpilot_p_inoc_scaffold_246_84
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

101157..102044
DNA (888bp) protein (296aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9X4_FLUTR rbh
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEA44132.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffen
scnpilot_p_inoc_scaffold_246_85
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

102119..103759
DNA (1641bp) protein (547aa)
amino acid permease n=1 Tax=Pedobacter agri RepID=UPI00029A1D37
putative amino acid-transporting permease
Amino acid transporter {ECO:0000313|EMBL:KGO89198.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sunc
scnpilot_p_inoc_scaffold_246_86
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

103770..104636
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9X5_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_246_87
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

104640..105173
DNA (534bp) protein (178aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9X6_FLUTR
scnpilot_p_inoc_scaffold_246_88
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

105201..106340
DNA (1140bp) protein (380aa)
acyl-CoA dehydrogenase domain-containing protein (EC:1.3.8.1)
acyl-CoA dehydrogenase n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00037503A4 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJS07641.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
scnpilot_p_inoc_scaffold_246_89
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

106418..106609
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9X8_FLUTR
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
scnpilot_p_inoc_scaffold_246_90
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

106648..107529
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9X9_FLUTR rbh
Tyrosine recombinase xerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
Displaying items 61-90 of 116 in total

View Taxonomy