ggKbase home page

scnpilot_p_inoc_scaffold_25_37

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 36197..37213

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDW2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 331.0
  • Bit_score: 191
  • Evalue 1.00e-45
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EHQ24302.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucila similarity UNIPROT
DB: UniProtKB
  • Identity: 34.1
  • Coverage: 331.0
  • Bit_score: 191
  • Evalue 1.40e-45
iron dicitrate transport regulator FecR similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 345.0
  • Bit_score: 154
  • Evalue 6.60e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1017
ATGACAGATAAGCAACACATACGGCAGCTACTGGACAATTATATCCGTGGTCAGTACACAAGGCAACAGCTTGACGAACTGCTACGTCACAGCACACAGACAGAGGATGAGCACACGGTCGGCGAACTGATCGAACAGTACCTTGCGGAGCTGGACACAGAAGATCTGTCGCAGACAGACAGGCTGAGCAAGCTACTGAACCGCACCGACAGGAAGATCAGGGAAGCCATACCGTTACCTGATCCGGTGACAGACATTCCGTCCGGCAAGCGCAGAGGCTTTCCCGGTCGATGGATGGCCGTAGCCGCATTGTTGATTACAGCTCTTTCATTTTCGCTGTATATGCTGCTGTACAATGCACCTGTACAGACGATCCGTATCACGGCTGACGGGACCGTAGCACAGCAGGTAGATCTACCGGACGGAAGCCAGGTGTGGCTCAATGCAGGTGCGACACTCACATACCCCGAAAAGTTCGACACTGACACACGGGCGATCACACTATCCGACGGACAGGCGTACTTCGATATAGCCCGGGACGAGAAGCGGCCGTTTACCGTAGATGCAGGTGCATTATCCGTACAGGTACTGGGTACTGCCTTCGAGATCACCAGCTACAACAATATGGAACATGCCAGCGTAGCGGTACAGCGAGGCAAGGTCAATGTATCACCGGGACATATGGTCAGCACCCCCGGAACCATCCTGACCGCAAACCAGAAAGCAACGGTCAATACCAGGACCGGAACTGTGGAAACCACGGACATCAATACGGATGATATAGCCGGCTGGAAAGATAACCGATTAGTGTTTTCAAGCGACGATTTTGCGACTGTGATCGAAGCCATACAACGCAAGTATAACGTCACTATTGACCTTAAAAAATCCGCACTACTACAGGAAAAAATAACGCTGCGACTGGACGATCAACCTGTCCGCACAGCCCTCGAAATATTAAGTATATCCAGCAATTTTAAATATGAACTTGCCAATGACAGCACCATCATAATTAAATGA
PROTEIN sequence
Length: 339
MTDKQHIRQLLDNYIRGQYTRQQLDELLRHSTQTEDEHTVGELIEQYLAELDTEDLSQTDRLSKLLNRTDRKIREAIPLPDPVTDIPSGKRRGFPGRWMAVAALLITALSFSLYMLLYNAPVQTIRITADGTVAQQVDLPDGSQVWLNAGATLTYPEKFDTDTRAITLSDGQAYFDIARDEKRPFTVDAGALSVQVLGTAFEITSYNNMEHASVAVQRGKVNVSPGHMVSTPGTILTANQKATVNTRTGTVETTDINTDDIAGWKDNRLVFSSDDFATVIEAIQRKYNVTIDLKKSALLQEKITLRLDDQPVRTALEILSISSNFKYELANDSTIIIK*