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scnpilot_p_inoc_scaffold_25_72

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(85647..86411)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Myroides RepID=H1Z6Y4_MYROD similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 252.0
  • Bit_score: 315
  • Evalue 4.50e-83
Uncharacterized protein {ECO:0000313|EMBL:AKH95189.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 253.0
  • Bit_score: 322
  • Evalue 6.80e-85
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 252.0
  • Bit_score: 314
  • Evalue 2.20e-83

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Taxonomy

Elizabethkingia meningoseptica → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 765
ATGTCAAAACTATCTGAAAACATGCGTTATCTGCGCAGCCAGCTGAACTCCTCTCAGCAAAAGATCGCAGATGATCTTATGATAACGAGGGGGCGATACGCAAAATATGAGGATGGAGCTGCTGAACCTCCGGTAGAATTGCTCATTCGTATCTCACGGTATTTTCACATCAGCATAGACCTGTTAGTTTCTATTGATCTACGAAGGTTTCCCTTGAAGGAAATAATTGATTTACCCGATAACCGTATCGTCCTGCCAATCGTAGTAGATGGCTCAAAGGAAAATAAGATCGAAATTGTACCACATAAGGCGTCAATGGGTTACCTGAACGGCTATGCCGATCCTGACTATATAGAAAGTCTGCAAACAATTTCGTTGCCATTTTTGGGAACAGGTAAGTTCAGGGCATTTCCCGCAGAAGGGGATTCAATGCCTCCCCATAAAGACAGCTCTTATATCATCGGAAGGTACGTAGAACGGATGGATCGCCTAAAAAAAGGAAAAGGATATGTTTTTATCACAAGAAACGAAGGTATGACCTACAAGCGTTTGGTAAAAGTAGAAGAAGAACAGTTGCTTGTTAGTGCCGACAACGAATTTTACGAACCGTACAGGATTCCATTTACCGATCTTTTGGAAATTTGGGAGTATGCAGCCAGTATTGCCACACAGGAATTTACAAGGGAAGATTTTAATTTAGATCATCAGACGGTTATACAGATGTTCCGGGAACTTAAAAATCAATTAAAAGATATTAAAGGCTGA
PROTEIN sequence
Length: 255
MSKLSENMRYLRSQLNSSQQKIADDLMITRGRYAKYEDGAAEPPVELLIRISRYFHISIDLLVSIDLRRFPLKEIIDLPDNRIVLPIVVDGSKENKIEIVPHKASMGYLNGYADPDYIESLQTISLPFLGTGKFRAFPAEGDSMPPHKDSSYIIGRYVERMDRLKKGKGYVFITRNEGMTYKRLVKVEEEQLLVSADNEFYEPYRIPFTDLLEIWEYAASIATQEFTREDFNLDHQTVIQMFRELKNQLKDIKG*