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scnpilot_p_inoc_scaffold_30_101

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 100526..100720

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H3I9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 98
  • Evalue 2.90e-18
Cold shock protein CspA {ECO:0000313|EMBL:EOR95734.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 98
  • Evalue 4.00e-18
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 64.0
  • Bit_score: 97
  • Evalue 1.10e-18

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Taxonomy

Arcticibacter svalbardensis → Arcticibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 195
ATGCAAGAAGGAACAGTAAAATTCTTCAATGAAACAAAAGGTTTTGGTTTCATTAATGACTCAAACAGCGGAAAAGACATTTTCGTACATTTATCAGGTTTGGTAAATAAAATCAGAGAAAACGATAAAGTTAGCTATGATGTTGAGGAAACTCCAAAAGGATTGAGCGCGATAAATGTGAAAGTGATTAACTGA
PROTEIN sequence
Length: 65
MQEGTVKFFNETKGFGFINDSNSGKDIFVHLSGLVNKIRENDKVSYDVEETPKGLSAINVKVIN*