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scnpilot_p_inoc_scaffold_296_65

Organism: SCNpilot_P_inoc_Plasmid-like_61_9

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(60797..61414)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas putida S12 RepID=V4H676_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 209.0
  • Bit_score: 155
  • Evalue 4.90e-35
Type IV secretion protein DotF {ECO:0000313|EMBL:AJA14226.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 209.0
  • Bit_score: 155
  • Evalue 1.20e-34
Putative type IV secretion system protein IcmG/DotF similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 209.0
  • Bit_score: 154
  • Evalue 4.00e-35

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAAGAACATGTCTTTTGGCAAACTGATGGCGATCTTCGGCGGTTCGCTCGTTGTCGTCATCATCCTCGCCGTGGTCATCATCAAGGCAACTTCCGGGCCGAAGCCCGGCAGCACGGTGGTCACTCAGCGTCACCAGACGCAGTTCCAGCCGCAGCAGCCGGACATTCTGGCCGAGCAGCTTCGTCGCGAGCAGGAAGCCTCTGCCGCAGCCCGCGAAATGTCTGCGCAGCAGTCTCAGGCAATGCAGCAGGCGCTGCAACAGCAGAATCAGGCCGTCATGCAGCGGCTTGACGGTATCGCCATCGGGCTGAACGCACTGGATCAGCGCGTTGCTGCGATTGAGAACAGCCGCCGTCCCACGGGCGTGCAGGTCATCAAACCCGAGCGCAAGCCACGCACCTCCCCGGTAAAGCAGCTTGAGAAAGGGGCTACGCCGCTTCCGGCCAACTCCGGCTACAAGGTGCAGGCCACTGTCGGCAAGCGTGCTTGGATCGCCGCTGGCGAGCACGAGGACAGCGTTTCCGTGGGCGAGACGCTGCCTCCGGTGAAAAAGCCGCTGGTCGTCCGCGCCGTGGATAACGAATCGGGCATCGTCATTACGAGCGCAACGCGCTAA
PROTEIN sequence
Length: 206
MKNMSFGKLMAIFGGSLVVVIILAVVIIKATSGPKPGSTVVTQRHQTQFQPQQPDILAEQLRREQEASAAAREMSAQQSQAMQQALQQQNQAVMQRLDGIAIGLNALDQRVAAIENSRRPTGVQVIKPERKPRTSPVKQLEKGATPLPANSGYKVQATVGKRAWIAAGEHEDSVSVGETLPPVKKPLVVRAVDNESGIVITSATR*