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scnpilot_p_inoc_scaffold_10779_4

Organism: SCNpilot_P_inoc_Chimera

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 1877..2494

Top 3 Functional Annotations

Value Algorithm Source
YeeE/YedE family protein n=1 Tax=Variovorax paradoxus RepID=UPI0003620F09 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 146.0
  • Bit_score: 114
  • Evalue 1.20e-22
YeeE/YedE {ECO:0000313|EMBL:KIF79960.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 62.0
  • Bit_score: 108
  • Evalue 1.60e-20
putative transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 70.0
  • Bit_score: 101
  • Evalue 2.30e-19

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGTCCATCGACTGGAGCCACTTCACGCCGCTCGCCTCGCTGGCTGGCGGCGTGCTCATCGGCATCGCCGCCGCGATGTTCGTGCTGCTCAACGGGCGCATCGCGGGCATCAGCGGCGTGCTGGGAGGCCTGCTCAGGCCGTCGAGGGGCGACATCGGCTGGCGCGTCGCCTTCGCCGAGCCACTGGGCTGGGCCAGAAAGGTGCTCAACGAGCTGCACGAGCGCAAGTACGCTGCTCTGACGTACGTCATCACGCTCGTGCGCGGGCTTGCGGACTGCAAGCGGCCCGGCACGCCCTCTCCGGACTCGTACATGACCGGCAGCGACTCCACGGCCGGGGGCGGGCGCGGCGGCAGCGCGTCGGTGTCGGTGTCGCGCAACAGCGTCGCGGGCGGCTCCGGCTCCGGCATGACGTACCAGGGCCGCATCCAGAGCCTGGCCGAGGTGTTGGCTCCGGCGCTGACACACTGCACCAACACGGACCGTCCCTTCTGCGTGTCGATGCCGCGCTCAGTGATCGTCGTCGTCGCATACTTGCTCTCCACGGGGCCCGGCGGCGTCAGCGGCGTCGAGACCGCGCCCACCATGGCGCAGCAGTTCGCGCAGGGCGCAAACTAA
PROTEIN sequence
Length: 206
MSIDWSHFTPLASLAGGVLIGIAAAMFVLLNGRIAGISGVLGGLLRPSRGDIGWRVAFAEPLGWARKVLNELHERKYAALTYVITLVRGLADCKRPGTPSPDSYMTGSDSTAGGGRGGSASVSVSRNSVAGGSGSGMTYQGRIQSLAEVLAPALTHCTNTDRPFCVSMPRSVIVVVAYLLSTGPGGVSGVETAPTMAQQFAQGAN*