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scnpilot_p_inoc_scaffold_388

Search features with annotation key words

Displaying items 31-60 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_388_31
unknown

Not on your lists

comp(34323..34604)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_388_32
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34707..35489
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380B95F
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EYR65909.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacte
N-formylglutamate amidohydrolase
scnpilot_p_inoc_scaffold_388_33
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35535..36776)
DNA (1242bp) protein (414aa)
Fosmidomycin resistance protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FWJ2_BURVI
Fosmidomycin resistance protein {ECO:0000313|EMBL:EYR68312.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter
major facilitator transporter
scnpilot_p_inoc_scaffold_388_34
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37045..38289
DNA (1245bp) protein (415aa)
PGAP1 family protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JF17_ANAD2 rbh
PGAP1 family protein
PGAP1 family protein {ECO:0000313|EMBL:BAO30380.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivo
scnpilot_p_inoc_scaffold_388_35
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38537..39145)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH40_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98781.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
putative methyltransferase, YaeB/AF_0241 family
scnpilot_p_inoc_scaffold_388_36
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39198..39590
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034AC5F3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX12745.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
scnpilot_p_inoc_scaffold_388_37
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39592..40356
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382BD4C
Uncharacterized protein {ECO:0000313|EMBL:KFN48157.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_p_inoc_scaffold_388_38
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40356..40733
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C3AE9
Uncharacterized protein {ECO:0000313|EMBL:EIL94908.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_388_39
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40807..41766
DNA (960bp) protein (320aa)
cytochrome C551 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B668B1
Uncharacterized protein {ECO:0000313|EMBL:KFN41209.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_388_40

Not on your lists

comp(41735..42271)
DNA (537bp) protein (179aa)
Outer membrane lipoprotein Slp (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AH42_9ZZZZ
Outer membrane lipoprotein Slp {ECO:0000313|EMBL:EQD55968.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
membrane protein
scnpilot_p_inoc_scaffold_388_41
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42289..43293)
DNA (1005bp) protein (335aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003717A88
protein involved in catabolism of external DNA
scnpilot_p_inoc_scaffold_388_42
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43349..45169
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PQ99_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ELX13752.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobact
conserved hypothetical protein
scnpilot_p_inoc_scaffold_388_43
unknown

Not on your lists

45266..45436
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_388_44
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45455..46801)
DNA (1347bp) protein (449aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodanobacter denitrificans RepID=M4NR22_9GAMM rbh
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
scnpilot_p_inoc_scaffold_388_45
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46947..47882
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B2751
Lytic murein transglycosylase {ECO:0000313|EMBL:EIL92929.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
lytic transglycosylase
scnpilot_p_inoc_scaffold_388_46
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47915..49177)
DNA (1263bp) protein (421aa)
peptidase S1 n=1 Tax=Dyella japonica RepID=UPI000371757A
peptidase S1
Peptidase S1 {ECO:0000313|EMBL:AHX12289.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_p_inoc_scaffold_388_47
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49301..49897
DNA (597bp) protein (199aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379CF03
ubiquinol-cytochrome c reductase, iron-sulfur subunit
scnpilot_p_inoc_scaffold_388_48
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49897..51162
DNA (1266bp) protein (422aa)
cytochrome B n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC79F7
petB; ubiquinol cytochrome c oxidoreductase, cytochrome b subunit; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
cytochrome b/b6 domain
scnpilot_p_inoc_scaffold_388_49
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51155..51916
DNA (762bp) protein (254aa)
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BSA0_XANC5
Cytochrome C {ECO:0000313|EMBL:GAN45229.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimini
petC; ubiquinol-cytochrome c reductase, cytochrome c1 subunit
scnpilot_p_inoc_scaffold_388_50
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52112..52735
DNA (624bp) protein (208aa)
Stringent starvation protein A {ECO:0000313|EMBL:KFL36667.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas
Stringent starvation protein A id=2992433 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
glutathione S-transferase
scnpilot_p_inoc_scaffold_388_51
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52760..53146
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000373CED4
ClpXP protease specificity-enhancing factor {ECO:0000313|EMBL:EIL96876.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
stringent starvation protein B
scnpilot_p_inoc_scaffold_388_52
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53356..55788
DNA (2433bp) protein (811aa)
serine/threonine protein kinase (EC:2.7.11.18)
Serine/threonine protein kinase n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AF47_PSEF1
serine/threonine protein kinase PpkA Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_388_53
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55820..56626
DNA (807bp) protein (269aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN51143.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
FHA domain protein id=2992439 bin=GWF1_Xanthomonadales_69_6 species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
FHA domain-containing protein
scnpilot_p_inoc_scaffold_388_54
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56634..57533)
DNA (900bp) protein (300aa)
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000372B0BF
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:GAN45224.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sourc
scnpilot_p_inoc_scaffold_388_55
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57637..60048)
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000380C2D8
Uncharacterized protein {ECO:0000313|EMBL:GAN45223.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_388_56
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60172..60438)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037EA558
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47285.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_388_57
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60525..61031
DNA (507bp) protein (169aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4Q7_FRAAD
phosphoribosylaminoimidazole carboxylase catalytic subunit PurE
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
scnpilot_p_inoc_scaffold_388_58
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61034..62170
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382C16E
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
phosphoribosylaminoimidazole carboxylase
scnpilot_p_inoc_scaffold_388_59
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62235..62813)
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
sodB; superoxide dismutase [Fe] protein (EC:1.15.1.1)
superoxide dismutase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3858C
scnpilot_p_inoc_scaffold_388_60
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63017..63334
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376596A
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimi
glutaredoxin
Displaying items 31-60 of 81 in total

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