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scnpilot_p_inoc_scaffold_388_19

Organism: SCNpilot_P_inoc_Xanthomonadales_63_13

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 20302..20874

Top 3 Functional Annotations

Value Algorithm Source
ECF sigma factor family protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5Y2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 179.0
  • Bit_score: 181
  • Evalue 1.00e-42
Uncharacterized protein {ECO:0000313|EMBL:KFN49482.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 186.0
  • Bit_score: 181
  • Evalue 1.40e-42
ECF sigma factor family protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 173.0
  • Bit_score: 175
  • Evalue 2.00e-41

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Taxonomy

Arenimonas composti → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGACCTCCCATGACGCAACGCCCGCTGCCGCTCGCCCTGCGCTCGACGATCCCGGTCTGCGTGTGCTGGTGGATCTGTTTTATGGAGATCTGCGCCGCATTGCGCGCCGCGAGCGGTTCCGCGCCGGGGCAGGTGCCACGCTGTGCACCACGGCGCTGGTCAACGAAGCCTGGCTGAAGCTTCAACGCACTCCCGCCTGGCAGGATCAGCGGCATTTCCTGGCGACCGCCGCCCTGGCGATACGGCAGGTACTGGTGAGCGATGCGCAGGCGCGCTTTTCCTTCAAGCGCGGCCAGGGTGAAAGCCCGATGAGCCTCGGCGAGGAAGGCATGCAGGTTCCGGATGCCGCGGATGAACAGATCGTGCAGGTCAATGATGCACTGGAACGACTTGCCGCGTTGAGTCCGCGCCTGGCGCAGGTGGTGGAGTGTCGCTTCTTCGCCGGCTACAGCGAATCCGAAACCGCGCAGGCGATGGGGCTCACCGATCGCACCGTGCGTCGCGACTGGGTGAAGGCGCGGGCTTGGCTGTTTCGCGAATTGGGCGAGGGCGCAGCCGATGGGCATGTCTGA
PROTEIN sequence
Length: 191
MTSHDATPAAARPALDDPGLRVLVDLFYGDLRRIARRERFRAGAGATLCTTALVNEAWLKLQRTPAWQDQRHFLATAALAIRQVLVSDAQARFSFKRGQGESPMSLGEEGMQVPDAADEQIVQVNDALERLAALSPRLAQVVECRFFAGYSESETAQAMGLTDRTVRRDWVKARAWLFRELGEGAADGHV*