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scnpilot_p_inoc_scaffold_2238_1

Organism: SCNpilot_P_inoc_Xanthomonadales_63_13

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3..1391)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WGP8_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 463.0
  • Bit_score: 934
  • Evalue 4.90e-269
conjugal transfer coupling protein TraG similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 463.0
  • Bit_score: 936
  • Evalue 2.10e-270
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:BAP44835.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 463.0
  • Bit_score: 936
  • Evalue 1.10e-269

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Taxonomy

Pseudomonas sp. StFLB209 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGCAAGGGACGAACGTGCTGTTCGGTCAGATCGCCGTCGTATTCGGCATCGTGATCGCCGGCGTGTGGGGCGCCACACAATGGACAGCAGCCGCCCTTGGCTATCAAGTACGCCTTGGCTCGCCCTGGTTCGACTTCCTTGGCACGTCGATCTACCACCCCTGGAAGCTGTTTGAGTGGTGGTTCTTCTTCGGGGCCTATGCACCGGAAGTATTCGACACCGGCGGCGCCATCGCCGGCGCCAGCGGCATGGTCGCCGTGGGCGTTGCCATCGCCATGTCGGTCTGGCGCTCGCGCCAAGCTCGCCTCGTCACCACCTACGGCTCTGCGCGCTGGGCCAACGCGCAGGACATTCACAAGGCGGGCCTCACGCAACCGGCCGGCGTGTTCCTCGGCCAGCACGACCGCCAGTACCTGCGGCATGAAGGCCCGGAACACGTCCTGACCTTCGCGCCTACGCGCTCGGGCAAGGGCGTCGGCCTTGTGGTGCCGACGCTGCTTTCCTGGCCCGCATCCGCCGTCATCCACGACATCAAAGGCGAGAACTGGCAGATCACCGCAGGCTGGCGCTCACGTTTCTCGCATTGCCTGCTGTTCAACCCGACCGATGCAAAGTCGGCGGCCTACAACCCGCTGCTGGAGGTGCGGCGAGGCGCGCATGAGGTGCGCGACGTGCAGAACATCGCCGACATTCTGGTCGATCCCGAAGGCGCGCTGGAGAAGCGCAACCATTGGGAAAAGACTTCGCACGCGCTGCTGGTCGGGGCCATCCTGCATGTGCTCTACGCAGGCGAAGACAAGACGCTGCGCGGCGTCGCCAACTTTCTGTCCGACCCGGCCCGCCCGTTCGAGCTGACCTTACACCGGATGATGACCACGCCGCACCTCGGCGATGGGCCGCATCCGGTCGTCGCATCGGCGGCGCGTGAAGTCCTCAACAAGAGCGACAACGAACGCTCGGGCGTTCTGTCCACGGCCATGTCGTTCCTCGGCCTGTACCGCGACCCGACCGTGGCCGAAGTCACCTCGCGCTGCGACTGGCGCATCGCTGACCTGATCGCGGCCGAGCATCCGGTATCGCTGTATCTGGTGGTGCCGCCTTCGGACATATCGCGGACGAAACCGCTCATTCGCCTGATTCTCAACCAGATCGGGCGGCGCCTCACCGAATCGCTCGATGGCTCCGATGGGATCGAGCGCCGCCACAAGCTGCTGCTGATGCTCGATGAGTTCCCTGCGCTGGGGCGCCTGGACTTCTTCGAGACGGCGCTGGCCTTCATGGCGGGCTACGGCATCCGCAGCTTCCTCATCGCGCAGTCGCTCAACCAGATCGACAAGGCGTATGGGCAAAACCACTCCATCCTCGACAACTGCCATGTGCGCGTGACG
PROTEIN sequence
Length: 463
MQGTNVLFGQIAVVFGIVIAGVWGATQWTAAALGYQVRLGSPWFDFLGTSIYHPWKLFEWWFFFGAYAPEVFDTGGAIAGASGMVAVGVAIAMSVWRSRQARLVTTYGSARWANAQDIHKAGLTQPAGVFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALEKRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPARPFELTLHRMMTTPHLGDGPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVT