ggKbase home page

scnpilot_p_inoc_scaffold_5927_4

Organism: scnpilot_dereplicated_Eukaryote_unknown_15

partial RP 6 / 55 BSCG 2 / 51 ASCG 0 / 38
Location: comp(5308..5622)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHR6_KOSOT similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 64.0
  • Bit_score: 93
  • Evalue 1.50e-16
Cold-shock protein {ECO:0000313|EMBL:EZQ19065.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 95.0
  • Bit_score: 96
  • Evalue 2.50e-17
cold-shock DNA-binding domain protein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 64.0
  • Bit_score: 93
  • Evalue 4.20e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGCTCAGCCTCTTTGCCAAGCGTGCGATCTGCATGATCACCAAGCCCGCCCTCATTGCTCCCCTCGCCTCCGTCGTCGGCGCCCCCGCCCGCCTCTTCTCCGATGCCCCCCGCGAGACTGGCACCGTCAAGTGGTTCGACTCCGCCAAGGGCTTCGGCTTCATCACCCGCGACGACGGCTCCGACGTCTTCGTCCACTTCTCCAACATCCAGGGCTCCGGCTACCGCAACCTCACCGACGGCCAGAAGGTCGAGTTCGTCATGGGCTCCACCCCCAAGGGCACCGCCGCCGTCAACGTCTCCCCCATCGCGTAA
PROTEIN sequence
Length: 105
MLSLFAKRAICMITKPALIAPLASVVGAPARLFSDAPRETGTVKWFDSAKGFGFITRDDGSDVFVHFSNIQGSGYRNLTDGQKVEFVMGSTPKGTAAVNVSPIA*