ggKbase home page

scnpilot_p_inoc_scaffold_432_curated

Search features with annotation key words

Displaying items 31-60 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_432_curated_31
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33298..33879
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W376_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE65364.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_32
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34152..34799)
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9Z1_CHIPD
LuxR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KJD31443.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
scnpilot_p_inoc_scaffold_432_curated_33
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34822..36648)
DNA (1827bp) protein (609aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQW6_NIAKG
putative signal transduction histidine kinase
scnpilot_p_inoc_scaffold_432_curated_34
unknown

Not on your lists

comp(36596..36913)
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_432_curated_35
Megavirus chiliensis, Viruses

Not on your lists

37077..39302
DNA (2226bp) protein (742aa)
Uncharacterized WD repeat-containing protein n=1 Tax=Megavirus courdo7 RepID=H2EAQ7_9VIRU
Putative WD repeat-containing protein {ECO:0000313|EMBL:AFX92403.1}; TaxID=1128140 species="Viruses; dsDNA viruses, no RNA stage; Mimiviridae; unclassified Mimiviridae.;" source="Megavirus courdo11.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_36
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39376..40428
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FJH0_9BACT
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_p_inoc_scaffold_432_curated_37
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40828..41256
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HTS2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ58917.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
ankyrin repeat-containing protein
scnpilot_p_inoc_scaffold_432_curated_38
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41555..42400
DNA (846bp) protein (282aa)
RteC protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT70_9SPHI
RteC protein {ECO:0000313|EMBL:EFK56971.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
Tetracycline regulation of excision, RteC
scnpilot_p_inoc_scaffold_432_curated_39
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42649..43002
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT69_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56970.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_40
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43014..43322
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRT0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56969.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_41
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43408..44871
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT67_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56968.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_42
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44878..46962
DNA (2085bp) protein (695aa)
DNA topoisomerase {ECO:0000313|EMBL:EFK56967.1}; EC=5.99.1.2 {ECO:0000313|EMBL:EFK56967.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT66_9SPHI
scnpilot_p_inoc_scaffold_432_curated_43
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46962..47840
DNA (879bp) protein (293aa)
Putative toxin-antitoxin system, toxin component, Fic family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT65_9SPHI
Putative toxin-antitoxin system, toxin component, Fic family {ECO:0000313|EMBL:EFK56966.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
KilA-N, DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_432_curated_44
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47986..48423
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94303.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_45
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48410..53836
DNA (5427bp) protein (1809aa)
Helicase C-terminal domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRT9_9SPHI
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEI94304.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
N-6 DNA methylase
scnpilot_p_inoc_scaffold_432_curated_46
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53883..54710)
DNA (828bp) protein (276aa)
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Empedobacter brevis RepID=UPI00036FF696
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGO11338.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
tetracycline regulation of excision RteC
scnpilot_p_inoc_scaffold_432_curated_47
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54786..56033)
DNA (1248bp) protein (416aa)
Transporter, major facilitator family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTV8_9SPHI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEI93588.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein; K07785 MFS transporter, NRE family, putaive nickel resistance protein
scnpilot_p_inoc_scaffold_432_curated_48
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56117..58519)
DNA (2403bp) protein (801aa)
TonB-dependent receptor plug domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2V3_9FLAO
Energy transducer TonB {ECO:0000313|EMBL:KGO09572.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_p_inoc_scaffold_432_curated_49
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59018..59341)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FTV9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93589.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_50
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59482..59904)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2V5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:AIL44270.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
scnpilot_p_inoc_scaffold_432_curated_51
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59939..61777)
DNA (1839bp) protein (613aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Putative cadmium-exporting ATPase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2V6_9FLAO
Putative cadmium-exporting ATPase {ECO:0000313|EMBL:EFK34667.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
scnpilot_p_inoc_scaffold_432_curated_52
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62018..63208)
DNA (1191bp) protein (397aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2V8_9FLAO
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:AIL44268.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
HlyD family secretion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_p_inoc_scaffold_432_curated_53
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63230..67624)
DNA (4395bp) protein (1465aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2V9_9FLAO
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EFK34670.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
AcrB/AcrD/AcrF family heavy metal cation efflux protein; K07239 heavy-metal exporter, HME family
scnpilot_p_inoc_scaffold_432_curated_54
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67646..68254)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2W0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34671.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_55
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68266..68949)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2W1_9FLAO
Membrane protein {ECO:0000313|EMBL:KGO09580.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_56
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69074..69337)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2W2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34673.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
scnpilot_p_inoc_scaffold_432_curated_57
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(69424..69849)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2W3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF76102.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
scnpilot_p_inoc_scaffold_432_curated_58
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(69942..70820)
DNA (879bp) protein (293aa)
Putative uncharacterized protein id=4782054 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
transcriptional regulator, arac family; K13652 AraC family transcriptional regulator
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_432_curated_59
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(71536..73536)
DNA (2001bp) protein (667aa)
TraG family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G230_9SPHI
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54472.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_432_curated_60
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

73750..74307
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRX0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94335.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
Displaying items 31-60 of 68 in total

View Taxonomy