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scnpilot_p_inoc_scaffold_411_curated

Search features with annotation key words

Displaying items 31-60 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_411_curated_31
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33094..34005)
DNA (912bp) protein (304aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RY79_9FLAO
scnpilot_p_inoc_scaffold_411_curated_32
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34037..34849)
DNA (813bp) protein (271aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:ESU19115.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ESU19115.1};; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S413_9FLAO
scnpilot_p_inoc_scaffold_411_curated_33
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35348..37450)
DNA (2103bp) protein (701aa)
NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
DNA ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMM0_CHIPD
scnpilot_p_inoc_scaffold_411_curated_34
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37730..39844
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZXE1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON78644.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein
scnpilot_p_inoc_scaffold_411_curated_35
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39986..40627)
DNA (642bp) protein (214aa)
NADPH-quinone reductase n=1 Tax=Empedobacter brevis RepID=UPI00036D49D6
NADPH-quinone reductase {ECO:0000313|EMBL:KFF11073.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
NAD(P)H dehydrogenase (quinone)
scnpilot_p_inoc_scaffold_411_curated_36
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40688..41254)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036F8B5B
cAMP-binding protein {ECO:0000313|EMBL:KFF11075.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
putative Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_411_curated_37
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(41370..41912)
DNA (543bp) protein (181aa)
GCN5-related N-acetyltransferase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9NK29_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AJQ25659.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
acetyltransferase
scnpilot_p_inoc_scaffold_411_curated_38
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41948..42703)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037FC74C
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EHQ43703.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
scnpilot_p_inoc_scaffold_411_curated_39
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42713..43816)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035F1197
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACU63512.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_411_curated_40
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43817..45196)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000368349B
Uncharacterized protein {ECO:0000313|EMBL:EGK05121.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_411_curated_41
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45226..48351)
DNA (3126bp) protein (1042aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003655A8C
Multidrug transporter AcrB {ECO:0000313|EMBL:KEQ30723.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein
scnpilot_p_inoc_scaffold_411_curated_42
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48365..49504)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000360AE11
Uncharacterized protein {ECO:0000313|EMBL:EGK05119.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
scnpilot_p_inoc_scaffold_411_curated_43
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49942..51039)
DNA (1098bp) protein (366aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB35_CHIPD
scnpilot_p_inoc_scaffold_411_curated_44
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(51051..51782)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LTC9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKB47414.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein; K06966
scnpilot_p_inoc_scaffold_411_curated_45
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(52009..53262)
DNA (1254bp) protein (418aa)
methionine adenosyltransferase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
S-adenosylmethionine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ8_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_411_curated_46
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53373..55457)
DNA (2085bp) protein (695aa)
Thiol:disulfide interchange protein DsbD {ECO:0000313|EMBL:KHJ38292.1}; EC=1.8.1.8 {ECO:0000313|EMBL:KHJ38292.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
proteiN-disulfide reductase (EC:1.8.1.8)
Protein-disulfide reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7H1_PALPW
scnpilot_p_inoc_scaffold_411_curated_47
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

55612..57903
DNA (2292bp) protein (764aa)
glycosyl transferase family protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Glycosyl transferase family 51 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMA8_CHIPD
Glycosyl transferase family 51 {ECO:0000313|EMBL:ACU64013.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_411_curated_48
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58019..58360
DNA (342bp) protein (114aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP92_9SPHI
Iron-sulfur binding protein {ECO:0000313|EMBL:AHF15069.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein
scnpilot_p_inoc_scaffold_411_curated_49
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58375..59049
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO43516.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_p_inoc_scaffold_411_curated_50
unknown

Not on your lists

comp(59089..59220)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_411_curated_51
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(59222..59536)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI000288B211
UPF0145 protein ADICYQ_0238 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_411_curated_52
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(59577..60305)
DNA (729bp) protein (243aa)
alpha-acetolactate decarboxylase (EC:4.1.1.5)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035DB112
Alpha-acetolactate decarboxylase {ECO:0000313|EMBL:EJF08394.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
scnpilot_p_inoc_scaffold_411_curated_53
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60383..61699)
DNA (1317bp) protein (439aa)
Arginyl aminopeptidase {ECO:0000313|EMBL:EMR03725.1}; EC=3.4.11.6 {ECO:0000313|EMBL:EMR03725.1};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
Arginyl aminopeptidase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NPT5_9BACT
peptidase M28
scnpilot_p_inoc_scaffold_411_curated_54
unknown

Not on your lists

61759..61866
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_411_curated_55
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62110..63333
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Prevotella micans F0438 RepID=H1Q0C5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAF05289.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
scnpilot_p_inoc_scaffold_411_curated_56
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63404..64396
DNA (993bp) protein (331aa)
Cell surface protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L8M0_SAPGL
Uncharacterized protein {ECO:0000313|EMBL:KJS06872.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
cell surface protein
scnpilot_p_inoc_scaffold_411_curated_57
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64365..65447
DNA (1083bp) protein (361aa)
YVTN family beta-propeller repeat protein id=4368799 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_p_inoc_scaffold_411_curated_58
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(65524..65826)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003651CD5
hypothetical protein; K09888 cell division protein ZapA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_411_curated_59
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(65905..67515)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B625B8
Uncharacterized protein {ECO:0000313|EMBL:GAL86799.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
scnpilot_p_inoc_scaffold_411_curated_60
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67566..68483)
DNA (918bp) protein (306aa)
ABC-type phosphate transport system periplasmic component-like protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSH4_CHIPD
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
ABC-type phosphate transport system periplasmic component-like protein {ECO:0000313|EMBL:ACU64423.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 31-60 of 75 in total

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