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scnpilot_p_inoc_scaffold_480_curated_12

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(12388..12972)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZU69_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 197.0
  • Bit_score: 157
  • Evalue 1.20e-35
Sigma-70 region 2 domain protein {ECO:0000313|EMBL:EAY26040.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 197.0
  • Bit_score: 157
  • Evalue 1.70e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 190.0
  • Bit_score: 150
  • Evalue 4.70e-34

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Taxonomy

Microscilla marina → Microscilla → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
TTGAAAGAAGAGTTCTATAACGATGTAGCGCTGCTGGACGGTCTTTCGGAAGGGGACCACAGGGCATCCAAAGTTATATATACCGTATATTATCCGATTATCAGTAAATGGATATTCTCAAAAGGAGGGGATGCAGAAAGCGCTCAGGATGTATTCCAGGATGGTTTGATCGTCTTATATCAGAAGTCTAAAGACCCGGAGTTCTGCCTGACCTGCAAAATAGGAACTTACCTGTTTGCGGTCTGTAAAAGGCTGTGGTTCAAAAAGTTTCAGCAAAAGCACTACCAGTATGAGCTACCCGTGGACTTTTCAGATGAAGAGCAGCCGGTATCCGGCAACCTGCGGGATGAGCAGCAGGATGTGGCCTATTTCCTGGAGAACGAGCATAATTATGAGGTGCTTCAGCGGGCTATGAAGGAACTGGGGGAGCCCTGCGGCCAGATATTGAAGGCTTTTTACATAGAGAAAAAGAGCATGCAGGATATAGCGGCCGTTCACCAGTACGCGAATATGGAAACAGCCAAGGTGCAGAAATACAAATGTCTCGGCAGGCTGAAAAAGATATACTTTAAATTAAAACAATAA
PROTEIN sequence
Length: 195
LKEEFYNDVALLDGLSEGDHRASKVIYTVYYPIISKWIFSKGGDAESAQDVFQDGLIVLYQKSKDPEFCLTCKIGTYLFAVCKRLWFKKFQQKHYQYELPVDFSDEEQPVSGNLRDEQQDVAYFLENEHNYEVLQRAMKELGEPCGQILKAFYIEKKSMQDIAAVHQYANMETAKVQKYKCLGRLKKIYFKLKQ*