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scnpilot_p_inoc_scaffold_480_curated_24

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(25016..26410)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDH0_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 462.0
  • Bit_score: 469
  • Evalue 3.40e-129
two component, sigma54 specific, transcriptional regulator, Fis family; K07713 two-component system, NtrC family, response regulator HydG similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 462.0
  • Bit_score: 469
  • Evalue 1.10e-129
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADY53953.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 462.0
  • Bit_score: 469
  • Evalue 4.80e-129

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1395
ATGAAACATATCCTGATTATAGAAGATGACACTACTTTTGCAACGGTTTTAGCCCGGTACCTGGAGCGCCACGATTATACCACCACGAAAGTAGGCAATATCAGGACGGCACGTGCCGAACTGGAGAAAGGGCACCAGGGTATTGATCTCATCCTGCTGGACTACAACCTGCCGGACGGTACCGGTATGGAGATACTGGAATACCTGACGCAGCAGCATATGATGATACCCGTGCTCATCATGACCGGTTTCCTGGATATTAAAACGGCAGTGGGCGCCATTAAAAAAGGCGCATCAGACTATATCACCAAGCCGATCAACCAGGAAGAGCTCCTGATGCAGATACAGGAAGCGCTTAAGCCTGCAGTACCCGAAAAGACAGCTGCCACGGTCAGCTCCTTAAAAAAGCAGGATGATGTTGTCGCTCATAATTATGTGGCCGGCCGGTCTGCGGAAGCCCTGGAGCTCAGCAGGTATATAGACCTGGTTGCCGGAACGGATATGACCGTGCTGATCGTGGGAGAAAGCGGGACGGGGAAAGAAAATGTAGCCCGCCTGCTGCATATGAAGAGCGGCAGGGCGGGTAAGCCTTTCGTGGCTATTGACTGCGGAGCGCTTTCCAATGAGCTGGCCTCAAGTGAGCTGTTCGGGCATGTCAAAGGCGCGTTCACCGGCGCGCTCCAGGATAAGAAAGGACAGCTTGAAATTGCAGATGGCGGTACTATTTTCCTGGATGAGGTAGGTAACCTGAGCTATGAGAACCAGATGAAGTTGCTGAGAGTGCTGCAGGAAAAGGAAATGATGCGGGTAGGGGACCATACCCCGTTAAAAATAGATGTCAGGGTGATAACCGCTACCAACGAGGATTTCCAGCAGGCCATATCGAAAGGGACTTTCCGGGAAGACCTCTATCACAGGTTGAACGAATTCAAGATCAGGATACCCTCCCTGTCCCAGCGAAAGGAAGATCTGGATGATTTCATTGAATTCTTTATCCGGCAGTCCAATGAGCAGTTGCATAAAAATATCCGGGGTATTGACGACGCTGTGAGGAAGATATTCTTCAGCTATCACTGGCCCGGTAATATCCGCGAATTGCAGAATGTGATCCGGAGGGCTGTCCTGCTGGCTTCCGGGGATGTCATTACCACGCGTGAGCTGCCGGAAGATATGGAAACGGTGATCAATGCCGCCGCCGTTCCCACATCCGTAGCATCGGTACAGGATATCAGGACGATCAATGAGCAGTTTGAAAAGGAGCTTATTATCAAAACGCTGATACAGACCCGTTATAATAAATCCAAGGCTGCCCGCATCCTGAAGATAGATAGGACCACGCTTTACAATAAGCTCAATAAGTACGGCATTCTCGATGAAGATGACAATGAAGGATAA
PROTEIN sequence
Length: 465
MKHILIIEDDTTFATVLARYLERHDYTTTKVGNIRTARAELEKGHQGIDLILLDYNLPDGTGMEILEYLTQQHMMIPVLIMTGFLDIKTAVGAIKKGASDYITKPINQEELLMQIQEALKPAVPEKTAATVSSLKKQDDVVAHNYVAGRSAEALELSRYIDLVAGTDMTVLIVGESGTGKENVARLLHMKSGRAGKPFVAIDCGALSNELASSELFGHVKGAFTGALQDKKGQLEIADGGTIFLDEVGNLSYENQMKLLRVLQEKEMMRVGDHTPLKIDVRVITATNEDFQQAISKGTFREDLYHRLNEFKIRIPSLSQRKEDLDDFIEFFIRQSNEQLHKNIRGIDDAVRKIFFSYHWPGNIRELQNVIRRAVLLASGDVITTRELPEDMETVINAAAVPTSVASVQDIRTINEQFEKELIIKTLIQTRYNKSKAARILKIDRTTLYNKLNKYGILDEDDNEG*