ggKbase home page

scnpilot_p_inoc_scaffold_366_curated_3

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 1846..2199

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Capnocytophaga sp. CM59 RepID=J6ID41_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 114.0
  • Bit_score: 89
  • Evalue 1.90e-15
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJU30453.1}; TaxID=936370 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. CM59.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 114.0
  • Bit_score: 89
  • Evalue 2.60e-15
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 63.0
  • Bit_score: 67
  • Evalue 4.10e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Capnocytophaga sp. CM59 → Capnocytophaga → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 354
ATGTCGTTCGGTAAAAAATTGTCGGAGCTCCGTAAAAGTAAGGGGTTGTCACAGGAGGACCTGGCTTTTGAGCTGGGCATTTCCCAGTCATCTGTTTCCAATTACGAAGGCGGCGCTACCCTGCCGGATATACTGGTGCTGGAACGGGTATCCTCCTATTTCAATATACCTGTTACGGAGCTGCTGTCAGGAGAACATAACACTTTTTATAATTCCAATAATGCCGGTGGTCAAAATGGTTATGTTGTCAATAATAACATCCCTGAAAAGCTGATAGAGCAATATGAAGCCACGATAACCGCATTGAAGGAGCAGATCGCTTTAATGAAGCAGTTGCTGGATGATAAAAAGTAA
PROTEIN sequence
Length: 118
MSFGKKLSELRKSKGLSQEDLAFELGISQSSVSNYEGGATLPDILVLERVSSYFNIPVTELLSGEHNTFYNSNNAGGQNGYVVNNNIPEKLIEQYEATITALKEQIALMKQLLDDKK*