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scnpilot_p_inoc_scaffold_453_curated_8

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(12515..13690)

Top 3 Functional Annotations

Value Algorithm Source
Probable sigma-70 factor, ECF subfamily n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11S84_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 392.0
  • Bit_score: 610
  • Evalue 1.10e-171
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 392.0
  • Bit_score: 610
  • Evalue 3.30e-172
Probable sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABG59730.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 392.0
  • Bit_score: 610
  • Evalue 1.50e-171

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Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1176
ATGACGGCTGTTTTATGCCGTCATTTTGGTTTGAAGCATATTGAAACCGCCGAAGATATTGCGAGCGATACTTTTCTGAAGGCGTCCGAGCATTGGGCAATTAACGGCGTGCCTGAAAACCCGGTAGCGTGGCTTTATACGGTTGCGAAGAACAAAGCCAGGGATTATTTTAAAAACCTATCGGTCTTTGAAACGAAAATCAAAACCGGGCTGATAACGGATATTTCAGGCGAAAATGATTTTGAGTTGGATACCCGCATCATTCCAGACAGCCAGTTGGCAATGATCTTTGCCGTTTGTAACCCTGCCAATTCAGACGAGGCACAGGTCTGCCTGGCGTTACAGGTACTTTGCGGCTTTAGTGTTGAAGAAATAGCCAATGCCTTTCTGGCAAGATCGGAAACCATTAAAAAAAGACTGCACAGAGCGAGAACCAATCTCAGGAACGATAATTTTCAGATTACAACCTTAGGCGAAGCAGAGATAACATCAAGATTAGATACCGTTTTAAGGACCTTATATTTATTATTTAACGAAGGTTATTTTTCCGGGACGAACAACCGGCTAATCCGGAAAGACCTATGTTCAGAAGCTGTACGGCTCACATTTTTATTGACCGAAAACCCGTTGACCAACCAGGGGAGAACCAATGCTCTGCTCGCCTTAATGTGCTTTCAGAGCTCACGCTTGGAAGCAAGAACGAATGATAAAGGTGAAGCCGTTTTATTTGATGAGCAGGACAGAAGCTTATGGGACCACACGCTGATCGAAAAGGGGAATTTCTACCTGGTAAATGCCTGTAACGGGAATGAAGTTTCAAAATATCACCTCGAAGCGGCCATTGCTTACTGGCACACCACACCGACAGACCAGGACAAATGGTTGCACATCTTACAGCTTTACAACCAGCTTATTTTGATTGAGTATTCACCAGTAACGGCATTGAACAGGCTCTTTGCTTTTGCAAAGGTTTATGGAAATGCAAAAGCCATTGAAGAAGCGGAAAAGCTGGATTTGATTGACAGCAGCTACTACCACGGGTTGTTAGGTTATTTGTATTCCGGTACGGACATTGCAAAAGCTATCAGGCATTACGGGCAGGCCGTTAAGCTAACCAGGTCCGGATCAGAAAAGAAAACCTTGAAGAAAGAAATCGAACGCCTGAAAAGCAGGTAA
PROTEIN sequence
Length: 392
MTAVLCRHFGLKHIETAEDIASDTFLKASEHWAINGVPENPVAWLYTVAKNKARDYFKNLSVFETKIKTGLITDISGENDFELDTRIIPDSQLAMIFAVCNPANSDEAQVCLALQVLCGFSVEEIANAFLARSETIKKRLHRARTNLRNDNFQITTLGEAEITSRLDTVLRTLYLLFNEGYFSGTNNRLIRKDLCSEAVRLTFLLTENPLTNQGRTNALLALMCFQSSRLEARTNDKGEAVLFDEQDRSLWDHTLIEKGNFYLVNACNGNEVSKYHLEAAIAYWHTTPTDQDKWLHILQLYNQLILIEYSPVTALNRLFAFAKVYGNAKAIEEAEKLDLIDSSYYHGLLGYLYSGTDIAKAIRHYGQAVKLTRSGSEKKTLKKEIERLKSR*