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scnpilot_p_inoc_scaffold_92_curated_119

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 147896..148753

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE96_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 285.0
  • Bit_score: 500
  • Evalue 8.60e-139
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 285.0
  • Bit_score: 500
  • Evalue 2.70e-139
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:AEV97287.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 285.0
  • Bit_score: 500
  • Evalue 1.20e-138

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 858
ATGAGACAGCTCAAAATTGCAACTCAGATTACCAATAGAGATTCTCAGGCAGTAGAGAAGTATCTTCAGGAGATCAGCAGGATACCTATGATCACACCGGAAGAAGAAACGCTTCTGGCCCAGAGGATACATGTAGGAGATCAGAGAGCACTGGAAAAATTGGTAAAGGCAAATTTGCGTTTCGTGGTCTCTGTTGCAAAGCAATACCAACACCAGGGATTGTCTTTGTCAGATTTGATCAATGAAGGGAATCTTGGACTTATAAAAGCCGCCCAGCGCTTTGATGAGACCAAAGGCTTTAAATTTATCTCTTACGCAGTATGGTGGATCCGCCAGTCTATTTTACAGGCGCTGGCAGAGCAGGGCAGGCTGGTAAGGTTACCGCAGAACAAGATCGGTACCTACAATAAGGCCAATAAAGCCTATATCGCGTTCGAGCAGGAAAATGAACGGGAGCCTTCTACGGAAGAGCTGGCATCTATCCTGGAAATGAGCGAAACTGAAATCGCCAATATCTTTAGCAGCAATACCCGCCATACTTCCCTGGATGCCCCGGTACACGAGGCCGAGGACGTGGCTATGGGCGATCTGCTGGAAGGCAGCAGCGATACGGATGACGATGTGATGAAAGATTCGCTGAAAGCCGAGATCCAACGCATTCTGAAATCCCTGACCACCCGTGAAGCAGAGATCATTTCCGCTTATTTCGGGCTGGAAGGCGATGATGGTCCTTCCATTGAAGAGATCGGGCAGAAATACGACCTTACCAAAGAACGCATTCGCCAGATCAAGGAACGCGCTATCAAACGCTTACAGAAAACCAGGTACAGCGGTGCCCTGAAATCCTACCTTGGCTAA
PROTEIN sequence
Length: 286
MRQLKIATQITNRDSQAVEKYLQEISRIPMITPEEETLLAQRIHVGDQRALEKLVKANLRFVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAEQGRLVRLPQNKIGTYNKANKAYIAFEQENEREPSTEELASILEMSETEIANIFSSNTRHTSLDAPVHEAEDVAMGDLLEGSSDTDDDVMKDSLKAEIQRILKSLTTREAEIISAYFGLEGDDGPSIEEIGQKYDLTKERIRQIKERAIKRLQKTRYSGALKSYLG*