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scnpilot_p_inoc_scaffold_454_curated_11

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 10239..10547

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VE1_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 95.0
  • Bit_score: 106
  • Evalue 2.20e-20
trxA; thioredoxin C-2 similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 95.0
  • Bit_score: 106
  • Evalue 6.90e-21
Thioredoxin {ECO:0000313|EMBL:ABG58625.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 95.0
  • Bit_score: 106
  • Evalue 3.10e-20

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Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 309
ATGGAAGATATTAATCCCATATTCCTGGAATTCATCAACAGTGATGAGCCAGTGCTGGTACAGTTCCACGCCGAATGGTGCGTACCCTGCAAGATGCTGGCGCCCGTAGTAGATGCTGTTGCCGCGCAGTTTGAAGCGCAGTTGAAGGTGCTTAAGGTAGACATCGACCGCAACAGGCCGATCACGGAACATCTGGACATACGTTCCGTGCCCACGATGATGATATTCAGGAAAGGAGAGATCTTATGGTATCATAACGGCGGCATTACGCCGGTAGAGCTTGCCAGGACCGTTAAGTCCTTCTTTTAA
PROTEIN sequence
Length: 103
MEDINPIFLEFINSDEPVLVQFHAEWCVPCKMLAPVVDAVAAQFEAQLKVLKVDIDRNRPITEHLDIRSVPTMMIFRKGEILWYHNGGITPVELARTVKSFF*