ggKbase home page

scnpilot_p_inoc_scaffold_4645_curated_3

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 4987..5886

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 296.0
  • Bit_score: 376
  • Evalue 2.70e-101
CRISPR-associated protein Cas1 n=1 Tax=Niabella aurantiaca RepID=UPI000380DAE4 similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 296.0
  • Bit_score: 377
  • Evalue 1.50e-101
Putative DNA repair protein; K15342 CRISP-associated protein Cas1 similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 313.0
  • Bit_score: 340
  • Evalue 4.90e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 900
ATGTTGAAACGTACCCTTTATTTTGGTAACCCGGCTTACCTGAGCACCCGTCTGGAACAGGTTATTATTGAAAGCCCGGGCAGTCCCAATGAGCATAAGGTCATACCTATTGAAGATATTGGTGTCCTGATCCTGGACCATAACCGGATAACCATTACCCAGCCGCTGCTGAACAAGCTTCTGGAGAATAATGTTGCAGTGATCACCTGTGACCAGCAGCACCATCCTTTGGGTATGTTTTATGTATTGGAAAGCCATACCCTACAAAGCCAGAAGTTCAGGCACCAGATAGCGGCATCCCTGCCATTAAAAAAGCAATTATGGCAGCAGGTCATCAGGGCCAAGATCGCCAACCAGGCCGGGCTGCTGGAGCGTCAGCGGCAGAATGCTGCTTACCTGCATAAGCTCCTGCCCAAGGTCAGGAGCGGTGATAGCGGCAACTGTGAAGCGAAAGCGGCGCTGTATTACTGGAAGTGGGTATTTCCCGATTTCCTGAATTTTAGCCGGTTCAGAGAAGGGGCGCCACCGAATAATTTGCTGAACTATGGTTATAGCCTCTTAAGAGCGATAACTGCCAGGAGCATCGTTGCTGCCGGGCTGATGCCCACATTGGGCATTTTTCACCGCAACCAGTACAATGCCTACTGCCTGGCGGATGATATGATGGAACCATACCGCCCTTATGTGGATGCAGTGGTATGTAATATTATCAGGAGCAACGGGGCTTATCTTCATATGACCCCGGGTATTAAAAAGGAGCTTCTCCAGATTCCTGCCATGGATGTCCGCATTAATAACCAGGTAAGTCCTTTGATGATCGCTGTTCAAAAGACCATTCAGAGCCTTTCAAAATGCCTGGAGGGGGAGAGCCGGAAGCTGCAGCTCCCTGAATGGGTATAA
PROTEIN sequence
Length: 300
MLKRTLYFGNPAYLSTRLEQVIIESPGSPNEHKVIPIEDIGVLILDHNRITITQPLLNKLLENNVAVITCDQQHHPLGMFYVLESHTLQSQKFRHQIAASLPLKKQLWQQVIRAKIANQAGLLERQRQNAAYLHKLLPKVRSGDSGNCEAKAALYYWKWVFPDFLNFSRFREGAPPNNLLNYGYSLLRAITARSIVAAGLMPTLGIFHRNQYNAYCLADDMMEPYRPYVDAVVCNIIRSNGAYLHMTPGIKKELLQIPAMDVRINNQVSPLMIAVQKTIQSLSKCLEGESRKLQLPEWV*