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scnpilot_p_inoc_scaffold_1576_curated_3

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(2569..3264)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 227.0
  • Bit_score: 379
  • Evalue 3.00e-102
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 225.0
  • Bit_score: 380
  • Evalue 1.50e-102
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 227.0
  • Bit_score: 379
  • Evalue 9.60e-103

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCAAAAATTACTAAAAACAGAAAAGCTGCAGAAGCTAAAATAGATAAAAACAAGTTTTATACTTTGACTGAGGCTGCTCAGTTAGTAAAAGATATCAACTGTACGAAGTTCGACTCTTCAGTTGATGTGCACGTACGCCTGGGCGTAGATCCGAAGAAAGCGGATCAGGCCTTACGCGGTACCGTATCTTTACCTCACGGAACCGGTAAAACAAAAACCGTACTGGTTTTATGTACCCCGGACAAGGAAGCCGAAGCGAAAGCTGCAGGCGCTGACTATGTAGGCCTGGATGAATTCGTTCAGAAGATCGACGGCGGATGGACAGATATCGATGTGATCATCGCTACGCCTTCCGTAATGCCTAAAATAGGTCGTTTAGGTAAAGTATTAGGTCCCCGGAACCTGATGCCTAACCCTAAAACAGGTACGGTAACCAACGATGTTGCTGCTGCTGTTACTGATGTTAAAGGCGGTAAAATTGCGTTTAAAGTAGATAAAGCCGGTATCATCCACGCTTCTATAGGCCGTGTATCTTTTGAGCCCGCAAAACTGGTGGAAAATGCTCAGGAGCTGATCAACACTTTAGTACGTATGAAACCTGCTACTGCCAAAGGTACTTATGTAAAAGGTGTAAGTCTGGCTTCTACTATGAGCCCGGGTATTGCGATTGATACTAAATCTGTAACGAACTAA
PROTEIN sequence
Length: 232
MAKITKNRKAAEAKIDKNKFYTLTEAAQLVKDINCTKFDSSVDVHVRLGVDPKKADQALRGTVSLPHGTGKTKTVLVLCTPDKEAEAKAAGADYVGLDEFVQKIDGGWTDIDVIIATPSVMPKIGRLGKVLGPRNLMPNPKTGTVTNDVAAAVTDVKGGKIAFKVDKAGIIHASIGRVSFEPAKLVENAQELINTLVRMKPATAKGTYVKGVSLASTMSPGIAIDTKSVTN*