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scnpilot_p_inoc_scaffold_302_curated_8

Organism: scnpilot_dereplicated_Bacteroidetes_8

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 6877..7461

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 193.0
  • Bit_score: 327
  • Evalue 1.20e-86
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 192.0
  • Bit_score: 236
  • Evalue 6.50e-60
peptide deformylase n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003736923 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 193.0
  • Bit_score: 282
  • Evalue 4.30e-73

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Taxonomy

Chryseobacterium sp. JM1 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAAGTTACCGGTTTACGGATATGGGAATAATGTGCTGAAAATGACAGCAGATAAGGTGGAGCAGGATTATCCCGGACTGGATACGCTCATTGCCGATATGTGGGAAACGATGGAAAACGCACAGGGCTGTGGACTGGCTGCACCGCAAATTGGCAAGCCGCTTCAGCTCTTTGTAGCGGACAGCAAAATTCTGTTTGATAATATGGGAGAAACAGAACGGAAAGATGTTTTTACCGAAGGAGATACGGGCATCCGGGAAGTATTTATCAATACAGAAATTATAAGCCTTTCTGAAAACAAATGGGAAGAAACGGAAGGTTGTTTGAGCCTGCCATTTCTGTCCGGCAAGGTGGTTCGTTCCTGGTCTGTGGAAGTGCAGTATCAAAATCAGCATTTTGAAACCATACAGAAAAAGTTTAGCGGAATGACTGCCCGTGTTATCCTGCACGAATACGACCATACGCAAGGCATTTTATACATAGACCGTGTAAAACCATTGAGTAAAAAACTGATGGAAAGTAAGCTGAAACAAGTGCTGAAAGGAAACGTTACCACGCCCTATAAAATGAAATTCAAGAACTAA
PROTEIN sequence
Length: 195
MKLPVYGYGNNVLKMTADKVEQDYPGLDTLIADMWETMENAQGCGLAAPQIGKPLQLFVADSKILFDNMGETERKDVFTEGDTGIREVFINTEIISLSENKWEETEGCLSLPFLSGKVVRSWSVEVQYQNQHFETIQKKFSGMTARVILHEYDHTQGILYIDRVKPLSKKLMESKLKQVLKGNVTTPYKMKFKN*