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scnpilot_p_inoc_scaffold_696_curated

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_696_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1359)
DNA (1359bp) protein (453aa)
AMP-dependent synthetase and ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8J2_9BURK
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1410..3080)
DNA (1671bp) protein (557aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002378320
diguanylate cyclase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_3
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3084..4187)
DNA (1104bp) protein (368aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237831F
extracellular solute-binding protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4248..6293
DNA (2046bp) protein (682aa)
DNA primase n=1 Tax=Acidovorax radicis RepID=UPI000237831E
DNA primase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6551..8920
DNA (2370bp) protein (790aa)
RNA polymerase sigma factor RpoD n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWS2_9BURK
RpoD family RNA polymerase sigma factor
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9006..9236
DNA (231bp) protein (77aa)
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9233..10252
DNA (1020bp) protein (340aa)
twin-arginine translocation pathway signal protein n=1 Tax=Acidovorax radicis RepID=UPI000237831C
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10368..11981
DNA (1614bp) protein (538aa)
chemotaxis protein n=1 Tax=Acidovorax radicis RepID=UPI000237831B
methyl-accepting chemotaxis transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12154..13191)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2A3_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13273..14487)
DNA (1215bp) protein (405aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQM6_9BURK
L-carnitine dehydratase/bile acid-inducible protein F
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14511..15560)
DNA (1050bp) protein (350aa)
Pyruvate carboxyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWR8_9BURK
pyruvate carboxyltransferase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15602..16507
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377FAE
LysR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16883..17191
DNA (309bp) protein (103aa)
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377FAD
transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17342..17701
DNA (360bp) protein (120aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0X8_9BURK
peptidyl-prolyl isomerase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17813..18181)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FAB
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18484..20574)
DNA (2091bp) protein (697aa)
sodium:solute symporter n=1 Tax=Acidovorax radicis RepID=UPI0002377FAA
Na+/solute symporter
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_17
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20577..20921)
DNA (345bp) protein (115aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA9
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20989..23379)
DNA (2391bp) protein (797aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZQ7_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_19
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23644..24465
DNA (822bp) protein (274aa)
PEP synthetase regulatory protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA7
PEP synthetase regulatory protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24637..25566)
DNA (930bp) protein (310aa)
Transcriptional regulator, LysR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y196_LEPCP
LysR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25676..26662
DNA (987bp) protein (329aa)
oxidoreductase FAD-binding subunit; K14581 naphthalene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component [EC:1.18.1.3]
2-polyprenylphenol hydroxylase-like oxidoreductase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQL0_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26841..27479)
DNA (639bp) protein (213aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
maleylacetoacetate isomerase n=1 Tax=Curvibacter lanceolatus RepID=UPI000364201E
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27506..28507)
DNA (1002bp) protein (334aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124M7_POLSJ
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28562..29686)
DNA (1125bp) protein (375aa)
Putative gentisate 1,2-dioxygenase n=1 Tax=Variovorax paradoxus B4 RepID=T1X662_VARPD
putative gentisate 1,2-dioxygenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29717..30433)
DNA (717bp) protein (239aa)
Putative fumarylacetoacetate (FAA) hydrolase n=1 Tax=Variovorax paradoxus B4 RepID=T1X6N5_VARPD
putative fumarylacetoacetate (FAA) hydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30663..31964)
DNA (1302bp) protein (434aa)
h16_A1630; pyridine nucleotide-disulphide oxidoreductase (EC:1.18.1.3); K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KB59_CUPNH
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_696_curated_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31984..32307)
DNA (324bp) protein (108aa)
naphthalene 1,2-dioxygenase n=1 Tax=Variovorax paradoxus RepID=UPI000382AD84
Rieske (2Fe-2S) domain-containing protein; K14578 naphthalene 1,2-dioxygenase system ferredoxin subunit
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_28
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32317..32793)
DNA (477bp) protein (159aa)
aromatic-ring-hydroxylating dioxygenase subunit beta; K05709 3-phenylpropionate/cinnamic acid dioxygenase subunit beta [EC:1.14.12.19]
Salicylate 5-hydroxylase, small oxygenase component n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4Y1F5_9PROT
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_696_curated_29
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32796..34121)
DNA (1326bp) protein (442aa)
Salicylate 5-hydroxylase, large oxygenase component n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AFS4_9PROT
putative aromatic-ring hydroxylating dioxygenase, alpha subunit
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_696_curated_30
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34837..38898)
DNA (4062bp) protein (1354aa)
cytochrome C family protein n=1 Tax=Acidovorax radicis RepID=UPI0002377C12
Uncharacterized protein {ECO:0000313|EMBL:EGL19019.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
cytochrome C family protein
Displaying items 1-30 of 35 in total

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