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scnpilot_p_inoc_scaffold_301_curated

Search features with annotation key words

Displaying items 31-60 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_301_curated_31
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33039..33575
DNA (537bp) protein (179aa)
Translation initiation factor IF-3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3R0_ACIDE
translation initiation factor IF-3; K02520 translation initiation factor IF-3
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_301_curated_32
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33758..33961
DNA (204bp) protein (68aa)
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 id=12552966 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rpmI; 50S ribosomal protein L35
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_301_curated_33
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33986..34345
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Acidovorax radicis RepID=UPI0002377166
ribosomal protein l20; K02887 large subunit ribosomal protein L20
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_301_curated_34
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


34457..35509
DNA (1053bp) protein (351aa)
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVD1_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_301_curated_35
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


35635..38082
DNA (2448bp) protein (816aa)
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Acidovorax radicis RepID=UPI0002377164
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_301_curated_36
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38117..38443
DNA (327bp) protein (109aa)
integration host factor subunit alpha n=1 Tax=Acidovorax radicis RepID=UPI0002377163
ihfA; integration host factor subunit alpha
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_301_curated_37
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38541..38981
DNA (441bp) protein (147aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377162
MerR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_301_curated_38
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39283..39582
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376DE1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_301_curated_39
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39681..39884)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376DE0
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_301_curated_40
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40529..43072
DNA (2544bp) protein (848aa)
nitrite reductase (NAD(P)h), large subunit; K00362 nitrite reductase (NAD(P)H) large subunit [EC:1.7.1.4]
nitrite reductase n=1 Tax=Acidovorax radicis RepID=UPI0002376DDF
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_301_curated_41
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43085..43450
DNA (366bp) protein (122aa)
nitrite reductase (NAD(P)h), small subunit; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4]
NAD(P)H-dependent nitrite reductase, small subunit n=1 Tax=Acidovorax sp. CF316 RepID=J1EEB4_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_301_curated_42
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43510..44817
DNA (1308bp) protein (436aa)
transcription antitermination regulator n=1 Tax=Acidovorax radicis RepID=UPI0002376DDD
ANTAR domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_301_curated_43
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45207..46529
DNA (1323bp) protein (441aa)
Phage integrase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2B5_9BURK
phage integrase
Phage integrase {ECO:0000313|EMBL:AFU46500.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_301_curated_44
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46570..46905
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BL9_MESSB
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_301_curated_45
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46902..47231
DNA (330bp) protein (110aa)
Uncharacterized conserved small protein-like n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NR38_9DELT
Xre family transcriptional regulator
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_301_curated_46
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47421..48011
DNA (591bp) protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:EXU78865.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
scnpilot_p_inoc_scaffold_301_curated_47
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48104..48313
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVS9_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO22713.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_301_curated_48
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48396..49319
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVS8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99473.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_301_curated_49
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49316..50872
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVS7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99472.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_301_curated_50
unknown

Not on your lists

50872..51219
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_301_curated_51
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51203..51649
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6P3_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM41918.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_301_curated_52
unknown

Not on your lists

51636..51866
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_301_curated_53
unknown

Not on your lists

51850..52077
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_301_curated_54
unknown

Not on your lists

52064..52261
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_301_curated_55
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52352..53101)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00037ACE76
Tax=CG_Rhodof_02
scnpilot_p_inoc_scaffold_301_curated_56
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53345..58657
DNA (5313bp) protein (1771aa)
DEAD/DEAH box helicase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHJ7_9GAMM
DEAD/DEAH box helicase {ECO:0000313|EMBL:KJA10076.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
DEAD/DEAH box helicase
scnpilot_p_inoc_scaffold_301_curated_57
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58676..61564
DNA (2889bp) protein (963aa)
Superfamily II DNA/RNA helicases, SNF2 family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHJ8_9GAMM
Superfamily II DNA/RNA helicases, SNF2 family {ECO:0000313|EMBL:CBL44290.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
hepA1; Superfamily II DNA/RNA helicases, SNF2 family
scnpilot_p_inoc_scaffold_301_curated_58
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61636..62049)
DNA (414bp) protein (138aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
recombinase n=1 Tax=Ralstonia solanacearum RepID=UPI00031F2D8B
plasmid stability protein StbB; K07062
scnpilot_p_inoc_scaffold_301_curated_59
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62046..62300)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WDD3_RALSL
Putative uncharacterized protein {ECO:0000313|EMBL:CCF97804.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_301_curated_60
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62412..66956
DNA (4545bp) protein (1515aa)
Uncharacterized protein n=6 Tax=Pseudomonas aeruginosa RepID=U8GRN8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:GAO26770.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
Displaying items 31-60 of 103 in total

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