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scnpilot_p_inoc_scaffold_555_curated

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Displaying items 31-60 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_555_curated_31
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37351..37602
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376978
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_32
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37750..38355
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376977
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_555_curated_33
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38402..38884
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376976
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_555_curated_34
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39166..41304
DNA (2139bp) protein (713aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI0002376975
TonB-dependent receptor
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_35
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41474..43096
DNA (1623bp) protein (541aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002376974
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_36
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43398..43748)
DNA (351bp) protein (117aa)
RNP-1 like RNA-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8C1_9BURK
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_555_curated_37
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43872..44081)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EFJ8_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_38
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45033..48290
DNA (3258bp) protein (1086aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376971
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16300.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_555_curated_39
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48287..49207
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376970
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16299.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
scnpilot_p_inoc_scaffold_555_curated_40
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49180..49887
DNA (708bp) protein (236aa)
glycosyl transferase n=1 Tax=Acidovorax radicis RepID=UPI000237696F
family 2 glycosyl transferase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
scnpilot_p_inoc_scaffold_555_curated_41
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50126..50851
DNA (726bp) protein (242aa)
chemotaxis protein CheY n=1 Tax=Acidovorax radicis RepID=UPI000237696D
two component transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_42
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50848..52239
DNA (1392bp) protein (464aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI000237696C
integral membrane sensor signal transduction histidine kinase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_555_curated_43
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52406..53500
DNA (1095bp) protein (365aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237696B
ABC transporter
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_555_curated_44
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53633..54655
DNA (1023bp) protein (341aa)
Auxin efflux carrier n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3P4_9BURK
auxin efflux carrier
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_45
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54726..55133)
DNA (408bp) protein (136aa)
glyoxalase n=1 Tax=Acidovorax radicis RepID=UPI0002376960
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_46
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55221..55556)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAB8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46081.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_555_curated_47
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55690..56328)
DNA (639bp) protein (213aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Acidovorax radicis RepID=UPI000237695F
pyridoxamine 5'-phosphate oxidase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_555_curated_48
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56478..57050
DNA (573bp) protein (191aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237695E
TetR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_555_curated_49
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57232..57693
DNA (462bp) protein (154aa)
(2Fe-2S)-binding protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3P2_9BURK
isoquinoline 1-oxidoreductase subunit alpha
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_555_curated_50
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57716..59986
DNA (2271bp) protein (757aa)
Isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1E9_9BURK
isoquinoline 1-oxidoreductase subunit beta
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_555_curated_51
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61159..62016)
DNA (858bp) protein (286aa)
UspA domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTR6_9BURK
UspA domain-containing protein {ECO:0000313|EMBL:EHL24332.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
UspA domain-containing protein
scnpilot_p_inoc_scaffold_555_curated_52
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62028..63512)
DNA (1485bp) protein (495aa)
Sulfate transporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTR7_9BURK
Sulfate transporter {ECO:0000313|EMBL:EHL24333.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
sulP; sulfate transporter
scnpilot_p_inoc_scaffold_555_curated_53
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63847..64722)
DNA (876bp) protein (292aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=12550229 bin=BDI species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_555_curated_54
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64871..65326
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y21_RHOFD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
scnpilot_p_inoc_scaffold_555_curated_55
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65339..66481
DNA (1143bp) protein (381aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y20_RHOFD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABD69333.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scnpilot_p_inoc_scaffold_555_curated_56
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66478..67404
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZB89_PSEAC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_555_curated_57
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67401..67634
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y19_RHOFD
hypothetical protein
Tax=CG_Rhodof_01
scnpilot_p_inoc_scaffold_555_curated_58
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67624..68256
DNA (633bp) protein (211aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y18_RHOFD
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABD69335.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scnpilot_p_inoc_scaffold_555_curated_59
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68250..68444
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y17_RHOFD
hypothetical protein
Tax=CG_Rhodof_04
scnpilot_p_inoc_scaffold_555_curated_60
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68610..69476
DNA (867bp) protein (289aa)
Transcriptional regulator, AraC family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T04_RHOFD
AraC family transcriptional regulator
Tax=CG_Rhodof_02
Displaying items 31-60 of 72 in total

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