ggKbase home page

scnpilot_p_inoc_scaffold_748_curated

Search features with annotation key words

Displaying items 31-60 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_748_curated_31
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29053..29772
DNA (720bp) protein (240aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002376A73
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AFU47800.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_748_curated_32
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29775..31808
DNA (2034bp) protein (678aa)
3-methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Acidovorax radicis RepID=UPI0002376A72
3-methylcrotonoyl-CoA carboxylase subunit alpha
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_748_curated_33
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31953..32786
DNA (834bp) protein (278aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2N2_ACIDE
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:EER61277.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
d-isomer specific 2-hydroxyacid dehydrogenase
scnpilot_p_inoc_scaffold_748_curated_34
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32810..33835)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2N1_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61276.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_748_curated_35
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33905..34753)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2N0_ACIDE
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_748_curated_36
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34750..35748)
DNA (999bp) protein (333aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2M9_ACIDE
3-hydroxyacyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_748_curated_37
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35847..36764
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I916_9BURK
LysR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_748_curated_38
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36862..37770
DNA (909bp) protein (303aa)
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXM6_9BURK
hydroxymethylglutaryl-CoA lyase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_748_curated_39
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37937..38455
DNA (519bp) protein (173aa)
prolyl-tRNA synthetase n=1 Tax=Acidovorax radicis RepID=UPI0002376704
YbaK/prolyl-tRNA synthetase associated domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_748_curated_40
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38452..38724
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9HWT4_DAPPU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_748_curated_41
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38728..39384
DNA (657bp) protein (219aa)
DSBA oxidoreductase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W8_9BURK
dsba oxidoreductase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_748_curated_42
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39601..41259
DNA (1659bp) protein (553aa)
General substrate transporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W7_9BURK
General substrate transporter {ECO:0000313|EMBL:EHL20346.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
general substrate transporter
scnpilot_p_inoc_scaffold_748_curated_43
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41404..43269
DNA (1866bp) protein (622aa)
Cyclic nucleotide-binding protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W6_9BURK
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EHL20345.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
nucleotidyltransferase; K07182 CBS domain-containing protein
scnpilot_p_inoc_scaffold_748_curated_44
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44203..46386)
DNA (2184bp) protein (728aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W5_9BURK
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EHL20344.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
scnpilot_p_inoc_scaffold_748_curated_45
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46383..46769)
DNA (387bp) protein (129aa)
Response regulator receiver domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W4_9BURK
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EHL20343.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
response regulator receiver domain-containing protein
scnpilot_p_inoc_scaffold_748_curated_46
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46766..49570)
DNA (2805bp) protein (935aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W3_9BURK
periplasmic sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_748_curated_47
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49574..49861)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W2_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20341.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_748_curated_48
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49951..50328)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4W1_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20340.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_748_curated_49
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50498..52306)
DNA (1809bp) protein (603aa)
sodium:solute symporter n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037FEF18
Na+/solute symporter; K14393 cation/acetate symporter
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_748_curated_50
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52318..52578)
DNA (261bp) protein (87aa)
hypothetical protein id=12552999 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_748_curated_51
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53134..53673
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4V8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20337.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_748_curated_52
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53775..54896)
DNA (1122bp) protein (374aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023766FF
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_748_curated_53
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55069..56184)
DNA (1116bp) protein (372aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023766FE
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_748_curated_54
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56368..62241
DNA (5874bp) protein (1958aa)
excinuclease ABC subunit A n=1 Tax=Acidovorax radicis RepID=UPI00023766FD
excinuclease ABC subunit A
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_748_curated_55
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62436..62942
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023766FC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_748_curated_56
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63145..63501
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5C0_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_748_curated_57
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63680..64111
DNA (432bp) protein (144aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4V1_9BURK
asnC family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_748_curated_58
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64277..65239
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023766F1
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_748_curated_59
unknown

Not on your lists

comp(65409..65996)
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_748_curated_60
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66028..66609)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VL88_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45580.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying items 31-60 of 78 in total

View Taxonomy