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scnpilot_p_inoc_scaffold_192_curated_140

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(146724..147434)

Top 3 Functional Annotations

Value Algorithm Source
FecI sigma-24 factor n=1 Tax=Acidovorax radicis RepID=UPI0002376687 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 212.0
  • Bit_score: 392
  • Evalue 2.70e-106
FecI-like sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 211.0
  • Bit_score: 289
  • Evalue 7.80e-76
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 213.0
  • Bit_score: 411
  • Evalue 1.00e-111

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGGCAATCGGCGTAAACACCCAGAGTGAGACCTACCTGTACCGCCTGTTGCGTTCCTATACTCGCCCGCATATGGCCACTGCCACCGATGTTCCTTCCGCCAACCTGCAAGCGTTGATCCGCGCCGCAGCCGGGGGAGACCATGCCGCCTTCGCGCAGATCTACCAGCGCACCCACGTGCATCTGTTCGGCGTTGCTGTGCGTATGTTGGGGCAAGGACAGGCGGCCGAGGATGTGCTGCAAGAGGCGTATGTGAGCATCTGGAAAAACGCTGAAAGCTACCGCAGCGAAGTGGGCGGGCAGCCTATCCAGCCCATGACATGGCTGATCGCCATCGTGCGCAACAAGGCGCTGGACGCCTTGCGCGCCCGCGCCCGGCGGCCTGAAAGCGCCTGGAATGACACCACGGAGCTTGCAGGCAGCGATGGGGATGGCAGCGACGCGCCGCCGGGTGCTGCGTCTGCATTGGCCCCCGCACCCAGCGCGATGCATTTGTTGGAGCAGGCCACCCAGGCGCTGCGCATCGAAGGCTGCATGAATGCGCTGGACGGAAGCTACCGGCAAAGCCTGGCACTGGCTTACTACCAGGGCCTGTCGCATTCAGAAGTGGCGGCCCAGATGGGCGCGCCCCTGGGTTCGGTCAAGGCGTGGATCCGGCGGGGCCTGGAGCGCCTGAAAAGCTGCCTGGCCGCGCAAGGGGTGGGCGCATGA
PROTEIN sequence
Length: 237
VAIGVNTQSETYLYRLLRSYTRPHMATATDVPSANLQALIRAAAGGDHAAFAQIYQRTHVHLFGVAVRMLGQGQAAEDVLQEAYVSIWKNAESYRSEVGGQPIQPMTWLIAIVRNKALDALRARARRPESAWNDTTELAGSDGDGSDAPPGAASALAPAPSAMHLLEQATQALRIEGCMNALDGSYRQSLALAYYQGLSHSEVAAQMGAPLGSVKAWIRRGLERLKSCLAAQGVGA*