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scnpilot_p_inoc_scaffold_419_curated_58

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(62964..63791)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Acidovorax radicis RepID=UPI00023777F6 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 265.0
  • Bit_score: 291
  • Evalue 7.60e-76
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 262.0
  • Bit_score: 217
  • Evalue 5.70e-54
Tax=GWA2_Burkholderiales_64_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 276.0
  • Bit_score: 521
  • Evalue 8.30e-145

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Taxonomy

GWA2_Burkholderiales_64_37_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGCAGAACGATGAACACCTGATGGCGCTGGTGAACGCCAGCCGCAGCACCCTGCTGCGCGCCGCCACGCGCCTGCTGGGCCCGGTCGAGGCCGAGGACGCCGTGCAGGACGCCTATGTGCGTGCGCTGGAGGCCAACGCCCCGGCGCTCAATGCCGCCCAGGCGTGGCTGCTGACGGTGGTGCGCAACCTGGCCATTGATCGACTGCGTCGCCGTCAGTGGATGGCGCAGTGGGCGGCAGAGACCATCCAGGCAGCGCAAGGGGATGCCCTCGTTTCGGTCGCGCCTTCGGCAGAGGCCGATGCCGCGCTGGCGCAGCAAGCCACGCTCGCGCTGCGGCGACTGGCGGCGTGCGTGACGCCCGTGGAGGGGGCTGCAGTGCTGCTGCATGCGGTGTTCGATGCCAGCCACGTCGAGCTGGCGCAGGCTACCGGCCGGACGGAAGCGGCCAGCCGCCAGCAATTGCGCCGCGCGTTGCAACGCCTGCGGCGGGCCGAAGAGGAGGCCCGCCGTGGTGATGGGCGCGATGAATCCAAGGACGCCGACCCTGCGGTGCTGCGCCTGTACCTGCAGTCGCTGCAATCGCGGGACGCACAGGGCCTGTGGGCCCTGCTGCGCCAGCCGCCGGTCAGTGCATTGGCCATACATGGTGAGGTGCATGCCGTGCTCCCGTTGCAGCACCAAGCCCGACGCCCACGGGCCAAGGCGGGTGGTGTGGTGCAGGTAGGTGGGCAACTGGGTTTGGTGCTTACGCTGGATGGCGTGACACTGTGCGTGTTGCCCCTGGGGCCATGCGCCGAGCTGGCGCACGAAGGCGTGGTGGCCTAG
PROTEIN sequence
Length: 276
MQNDEHLMALVNASRSTLLRAATRLLGPVEAEDAVQDAYVRALEANAPALNAAQAWLLTVVRNLAIDRLRRRQWMAQWAAETIQAAQGDALVSVAPSAEADAALAQQATLALRRLAACVTPVEGAAVLLHAVFDASHVELAQATGRTEAASRQQLRRALQRLRRAEEEARRGDGRDESKDADPAVLRLYLQSLQSRDAQGLWALLRQPPVSALAIHGEVHAVLPLQHQARRPRAKAGGVVQVGGQLGLVLTLDGVTLCVLPLGPCAELAHEGVVA*