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scnpilot_p_inoc_scaffold_555_curated_20

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(25642..26976)

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Acidovorax radicis RepID=UPI0002376CF2 similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 444.0
  • Bit_score: 815
  • Evalue 2.40e-233
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 444.0
  • Bit_score: 766
  • Evalue 5.30e-219
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 445.0
  • Bit_score: 838
  • Evalue 3.80e-240

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGACACCGCACCGGCCCCTCTCCCTGTCACTTCTGTCCCTGGCGCTCGGCGCGGCGCTGAGCGCTCCAGCGCACGCCCAGAGCCTGCTGGAGCTGGTGGAATCGGCACGCACCTATGACACGACCTGGCAGTCGGCCCGAGCCCAGCTCGACGCAGCATCCCGCCGCGCCGACCAGGCCCGCGCCGGCCTGCTGCCCAGCGCCGCGCTCACGGCCGGACTCAGCCGTGCCAATGTGGAACTGAGCCGCCCGCCTGTGGAGAACACCGGCACCACGCAGACGGTGGGCGTGCAGGCCTCTCAACCGCTGTACCGCCCCGCCAACCGCATCACGCTGGAGCAAGGCCAGCGCGGCATTGACGTGGCCCAGGCGCAGTTGGACGCCGCCACGCAAGACCTGCTGGTGCGCGTGAGCCAGGCCTACTTTGACGTGCTGGCCGCGCAGGACACCCTGGCCTTCGTGCAGGCGCAAAAAGCCGCCGTGTCGGAGCAACTGGCCTCCGCCAAGCGCAACTTCGAGGTGGGCACCACCACCGTCACCGATTCGCGCGAGGCCCAGGCCCGCTACGACCTCGTGGTGGCCCAGGAAATCGCGGCCGAAAACGACCTGCGCGTGAAACGCCTGGCACTGGACCAGCTGGCGGGCATCACCGGCACCAAGCCCCAGCCGCTGGCGCTGCCCGTGCAACTGCCAACGGTGCAGCCCGACAACGTGACCACCTGGGTGGACACTGCACGCGACCAGCAGCCCGGCGTACGCCAGGCCGCCATCGCGCTGGACATTGCCCGCCTTGAAACCAAAAAGGCCGAAACCGGCCACCTGCCCACCCTGGACCTACAGGTGGGCTACAACGTCACGCGCAATCCGAATGGCACCATCACGGCGCCCGGCGTGAACAACCGCACCAACAGCGCCAGCGTGGGCGTGGCCTTCAATCTGCCGCTGTTTGCCGGATTTGCGGTGCAAAACCGCGTGAAGGAAACCCTGGCGCTGGAAGAAAAGGCCAGCGCCGACCTGGAGACCACGCGCCGCAACGTGGCCCAGGCCACGCGCGCCGCCTTCTTTGGCGTGCAATCCGGCCAGGGCCAGGTGCAGGCCCTGGAGGCTGCCGAAGCCTCCAGCCAGAGTGCGCTCGATGCCAACAAGCTCGGTTACCAGGTGGGCGTGCGCATCAACATCGACGTGCTCAATGCCCAAAGCCAGCTCTTCCAGACCAAGCGCGACCTGGCCCAGGCCCGCTACAACGTGCTGCTCGGCACGCTGAAATTGCGCCAGGCGGCGGGCACGCTGACGCAGCAGGACATTGAGGCGATCAACGCCTTGCTGGTGAAGTAG
PROTEIN sequence
Length: 445
MTPHRPLSLSLLSLALGAALSAPAHAQSLLELVESARTYDTTWQSARAQLDAASRRADQARAGLLPSAALTAGLSRANVELSRPPVENTGTTQTVGVQASQPLYRPANRITLEQGQRGIDVAQAQLDAATQDLLVRVSQAYFDVLAAQDTLAFVQAQKAAVSEQLASAKRNFEVGTTTVTDSREAQARYDLVVAQEIAAENDLRVKRLALDQLAGITGTKPQPLALPVQLPTVQPDNVTTWVDTARDQQPGVRQAAIALDIARLETKKAETGHLPTLDLQVGYNVTRNPNGTITAPGVNNRTNSASVGVAFNLPLFAGFAVQNRVKETLALEEKASADLETTRRNVAQATRAAFFGVQSGQGQVQALEAAEASSQSALDANKLGYQVGVRINIDVLNAQSQLFQTKRDLAQARYNVLLGTLKLRQAAGTLTQQDIEAINALLVK*