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scnpilot_p_inoc_scaffold_1703_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1703_curated_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2940)
DNA (2940bp) protein (980aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3Z4_9BURK
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EHL20687.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_1703_curated_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3076..4005)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HQ71_PSEST
Membrane protein {ECO:0000313|EMBL:AHL75488.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
scnpilot_p_inoc_scaffold_1703_curated_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4164..5252
DNA (1089bp) protein (363aa)
tartrate dehydrogenase (EC:1.1.1.93); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Tartrate dehydrogenase {ECO:0000313|EMBL:ABM43001.1}; EC=1.1.1.93 {ECO:0000313|EMBL:ABM43001.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Tartrate dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9S6_ACISJ
scnpilot_p_inoc_scaffold_1703_curated_4
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5322..6068)
DNA (747bp) protein (249aa)
Putative methyltransferase type 11 n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5REQ5_9RHOO
Putative methyltransferase type 11 {ECO:0000313|EMBL:EGK71386.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
type 11 methyltransferase
scnpilot_p_inoc_scaffold_1703_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6184..7263
DNA (1080bp) protein (360aa)
Patatin n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T849_ACIDE
Patatin {ECO:0000313|EMBL:EER59351.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
patatin; K07001 NTE family protein
scnpilot_p_inoc_scaffold_1703_curated_6
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7392..8801)
DNA (1410bp) protein (470aa)
PmbA protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WY77_DELAC
protein pmbA-like
Peptidase PmbA {ECO:0000313|EMBL:KEH08537.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_p_inoc_scaffold_1703_curated_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8882..9562
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370060B
hypothetical protein; K09889 ribosome-associated protein
Uncharacterized protein {ECO:0000313|EMBL:ACM32448.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1703_curated_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9555..10151
DNA (597bp) protein (199aa)
molybdopterin adenylyltransferase; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75]
Molybdopterin adenylyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4W1_ACISJ
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:ABM41286.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_1703_curated_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10166..11803
DNA (1638bp) protein (546aa)
Sulphate transporter n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF83_ACIET
sulfate transporter
Sulphate transporter {ECO:0000313|EMBL:ACM32446.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1703_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11862..12959
DNA (1098bp) protein (366aa)
alcohol dehydrogenase (EC:1.1.1.2)
Alcohol dehydrogenase (NADP(+)) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEY3_ALIDK
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:GAO22492.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1703_curated_11
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12983..13645)
DNA (663bp) protein (221aa)
Nitroreductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF81_ACIET
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACM32444.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_1703_curated_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13651..14442)
DNA (792bp) protein (264aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:ABM41282.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ABM41282.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Serine acetyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4V7_ACISJ
serine acetyltransferase-like
scnpilot_p_inoc_scaffold_1703_curated_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14475..15251)
DNA (777bp) protein (259aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
RNA methyltransferase, trmh family, group 1; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
rRNA methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365841C
scnpilot_p_inoc_scaffold_1703_curated_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15364..16329
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I0_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61648.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_p_inoc_scaffold_1703_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16467..17387
DNA (921bp) protein (307aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U281_ALIDB
Inositol monophosphatase {ECO:0000313|EMBL:ADU98885.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1703_curated_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17406..18320)
DNA (915bp) protein (305aa)
TrkA-N domain protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q889_ACIAP
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:ADX47087.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1703_curated_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18369..19421
DNA (1053bp) protein (351aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TA28_ACIDE
CDP-6-deoxy-delta-3,4-glucoseen reductase {ECO:0000313|EMBL:EHL24887.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
CDP-6-deoxy-delta-3,4-glucoseen reductase
scnpilot_p_inoc_scaffold_1703_curated_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19436..20407
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE7_ALIDB
hypothetical protein
Extracytoplasmic binding receptor {ECO:0000313|EMBL:GAO27307.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1703_curated_19
unknown

Not on your lists

20546..21121
DNA (576bp) protein (192aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1703_curated_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21162..22043)
DNA (882bp) protein (294aa)
YdjC family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE6_ALIDB
hypothetical protein
YdjC family protein {ECO:0000313|EMBL:GAO27306.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1703_curated_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22077..22445
DNA (369bp) protein (123aa)
GtrA family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TSE5_ALIDB
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:ADU99168.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_p_inoc_scaffold_1703_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22399..24000)
DNA (1602bp) protein (534aa)
Glycosyl transferase family 39 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBJ3_ALIDK
glycosyl transferase family 39
Glycosyl transferase family 39 {ECO:0000313|EMBL:AEB85838.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_1703_curated_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23997..24977)
DNA (981bp) protein (327aa)
Glycosyl transferase family 2 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBJ4_ALIDK
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEB85839.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_1703_curated_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25132..25626)
DNA (495bp) protein (165aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE2_ALIDB
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:GAO27302.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_1703_curated_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25607..27169)
DNA (1563bp) protein (521aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19]
poly(A) polymerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036846A1
scnpilot_p_inoc_scaffold_1703_curated_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27166..27951)
DNA (786bp) protein (262aa)
HAD family hydrolase id=12550203 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
had-superfamily subfamily ib hydrolase, tigr01490
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1703_curated_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27961..28668)
DNA (708bp) protein (236aa)
DnaA regulatory inactivator Hda n=2 Tax=Alicycliphilus denitrificans RepID=E8TSD9_ALIDB
DnaA regulatory inactivator Hda; K10763 DnaA-homolog protein
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:AEB85843.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_1703_curated_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28919..29959
DNA (1041bp) protein (347aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBK0_ALIDK
scnpilot_p_inoc_scaffold_1703_curated_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29969..31006
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA55_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43130.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_1703_curated_30
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31130..31702
DNA (573bp) protein (191aa)
Isochorismatase hydrolase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q899_ACIAP
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADX47097.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Displaying items 1-30 of 37 in total

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