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scnpilot_p_inoc_scaffold_3388_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3388_curated_1
CG_Arma_02, Armatimonadetes, Bacteria

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3..779
DNA (777bp) protein (259aa)
GTPase subunit of restriction endonuclease-like protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LHV4_9BACT
hypothetical protein
Tax=CG_Arma_02
scnpilot_p_inoc_scaffold_3388_curated_2

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780..2981
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQC2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09443.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein; K09124 hypothetical protein
scnpilot_p_inoc_scaffold_3388_curated_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3659..4594
DNA (936bp) protein (312aa)
RNA polymerase sigma factor RpoH n=1 Tax=Acidovorax sp. CF316 RepID=J0KRF8_9BURK
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
RNA polymerase sigma factor rpoh; K03089 RNA polymerase sigma-32 factor
scnpilot_p_inoc_scaffold_3388_curated_4
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4655..5218)
DNA (564bp) protein (188aa)
Electron transport protein SCO1/SenC n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T440_ACIDE
Photosynthetic protein synthase I {ECO:0000313|EMBL:KJA10659.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
electron transport protein sco1/senc; K07152
scnpilot_p_inoc_scaffold_3388_curated_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5278..6174)
DNA (897bp) protein (299aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase {ECO:0000255|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000255|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000255|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000255|HAMAP-Rule:MF_00154}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Protoheme IX farnesyltransferase n=2 Tax=Acidovorax RepID=COXX_ACIET rbh
scnpilot_p_inoc_scaffold_3388_curated_6
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6171..7337)
DNA (1167bp) protein (389aa)
Cytochrome oxidase assembly n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TU05_ACIAC
uncharacterized LOC100487138
Cytochrome oxidase assembly {ECO:0000313|EMBL:ABM34443.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_3388_curated_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7337..8047)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBL7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43642.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_3388_curated_8
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8016..8744)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EBK0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE49796.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3388_curated_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8817..9698)
DNA (882bp) protein (294aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase, subunit III n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBM0_ACISJ
Cytochrome c oxidase, subunit III {ECO:0000313|EMBL:ABM43645.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_3388_curated_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9722..9901)
DNA (180bp) protein (60aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002376619
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying 10 items

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