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scnpilot_p_inoc_scaffold_4632_curated_6

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 5845..6363

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilin structural subunit n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VFU9_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 174.0
  • Bit_score: 231
  • Evalue 7.60e-58
Fimbrial protein EcpC {ECO:0000313|EMBL:CEG53260.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 174.0
  • Bit_score: 231
  • Evalue 1.10e-57
type IV pilin structural subunit; K02650 type IV pilus assembly protein PilA similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 174.0
  • Bit_score: 195
  • Evalue 1.90e-47

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Taxonomy

Pseudomonas xanthomarina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGAAAACGAAACTACAAAAAGGCTTCACCTTGATTGAACTGATGATCGTGGTAGCCATCATCGGTATTTTGGCCGCCGTGGCGCTACCCGCCTACCAAGAATACACCGTGCGTGCCAAGATCGCAGAGATGATAATCGCAGGCAGCACTGCCAAGTCTGCGGTCACAGAAGCCTTCCAAGCTGGTGGCGTTGCTGGTGTAACAGGCATGGCCACCGAATACAACGCCCGTGCAATCACTGAGAAACAATCCAAATTTGTTGATGATGTGCAAATCCACACCACGTTGGGCGTTGTGACCGTAACCAGCGCCACATCCACCGCGACCCTCCCCGCCGATGCACAAGGCAAAACGTTAATCTTCACACCCAACGTCCAACAAGCGTTGCTGACGGCCGGCGTTACGGGGGCAATTGATTGGGCTTGCGCCTCGGCCACCAATGCCACTGCGACCGCGCGTGGTCTGGCCACGGGGTTGGGCACAATGCCCGTGAAGTATGCCCCGGCCGAATGCCGTTAA
PROTEIN sequence
Length: 173
MKTKLQKGFTLIELMIVVAIIGILAAVALPAYQEYTVRAKIAEMIIAGSTAKSAVTEAFQAGGVAGVTGMATEYNARAITEKQSKFVDDVQIHTTLGVVTVTSATSTATLPADAQGKTLIFTPNVQQALLTAGVTGAIDWACASATNATATARGLATGLGTMPVKYAPAECR*