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scnpilot_p_inoc_scaffold_1195_curated_28

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(24807..25508)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-related protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4E5_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 229.0
  • Bit_score: 337
  • Evalue 1.30e-89
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 229.0
  • Bit_score: 337
  • Evalue 4.20e-90
ABC transporter-related protein {ECO:0000313|EMBL:ACB35846.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 229.0
  • Bit_score: 337
  • Evalue 1.90e-89

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGACGGCGGCGCTCACGATCCACGGCCTGAACGCCTGGTACGGCGAATCGCACGTGCTGCACGGCATCGACCTGGAGGTGCGCCAGGGCGAGGTCGTCACGCTGCTGGGCCGCAACGGCGCGGGCCGCTCGACCACGATGCGCGCCATCCTGGGCCTGGTGGGGCGGCGCGCAGGGCGTATCGAGGTCTTCGGCCACAACGTGATGGCGCTGCCGCCGCACCGCATCGCCCGCCTGGGCGTGGGCTGGTGCCCGGAGGACCGGGGCATCTTCTCGGCGCTGACGGCCGAGGAGAACCTGCTGCTCGCGCCCGTGGTGGCCGAGGGCGGCATGCCGCTCGACGAGATCTACGCGCTGTTCCCGAATCTGGCCGAGCGCCGCCACAGCCCCGGCACCAAGCTGTCGGGCGGCGAGCAGCAGATGCTGGCGCTGGCGCGCATCCTGCGCACGGGCGCCCGCCTGCTGCTGCTCGACGAGATCACCGAGGGCCTTGCGCCCGTCATCGTGCAGGCGCTGGGCCACGCCATCGCCCACCTGCGCGAGCGCGGCTACACGATGGTGCTGGCCGAGCAGAACTTCCGCTTCGCCGCGCCGCTGGCCGACCGCCACTGCGTGCTGGAGCACGGGCAGGTGGTGGCGACCATCACCCGCGCCGAACTGCCGTCGAAAACCGAGATGCTGCACGGCCTGCTGGGCGTGTAG
PROTEIN sequence
Length: 234
MTAALTIHGLNAWYGESHVLHGIDLEVRQGEVVTLLGRNGAGRSTTMRAILGLVGRRAGRIEVFGHNVMALPPHRIARLGVGWCPEDRGIFSALTAEENLLLAPVVAEGGMPLDEIYALFPNLAERRHSPGTKLSGGEQQMLALARILRTGARLLLLDEITEGLAPVIVQALGHAIAHLRERGYTMVLAEQNFRFAAPLADRHCVLEHGQVVATITRAELPSKTEMLHGLLGV*