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scnpilot_p_inoc_scaffold_2749_curated_11

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(10693..11439)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal small subunit pseudouridine synthase A (EC:5.4.99.-); K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 245.0
  • Bit_score: 388
  • Evalue 2.20e-105
Pseudouridine synthase family protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KNJ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 245.0
  • Bit_score: 390
  • Evalue 1.40e-105
Pseudouridine synthase family protein {ECO:0000313|EMBL:EJE52773.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 245.0
  • Bit_score: 390
  • Evalue 2.00e-105

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCAATTGCAGGATATTCTTTATTCCCAAGGCTTCGGAACCCGGCGTGTATGCGCGGGGCTGGTGCAGCAAGGCTGGGTGGAGATTTCCGGTCTAGGAGAGAAGGGCGCTCCCGTCATATGCACCGACGCAACGCAGGAATTTGTTCCGGAGGGGCTTCATTTGCGTGTTCAGGGCGTGGATTGGCTGTACCAGGCCAAGGCCTATCTGATGCTGCACAAGCCTGCGGGAACAGAGTGCTCCCAGAAGCCCTCGGCATACCCCAGCATCTACACCTTGCTGCCCAGTCCGCTGCGCCAGCGTCCCAGCAAAAGCGCGGTGCAGGGCGTTCAGGCTGTGGGCCGGCTGGACCAGGATACGACCGGCCTGCTGCTCATGAGCGACGATGGCCAATTCATTCATCGCATGAGTTCCCCCAAGAAGCACGTGCCCAAGGTCTATCGTGTGTATGCGAAACACGTGCTGACGGCGGAGCAGGTCGGGCGTCTGCTGTCCGGCGTTGTCTTGGACGATGATCCTCACCCCGTGAAGGCTGCGGATTGTGTGCGGGTCGATGACCACGTCATGGACCTTACGTTGACCGAGGGCAAATACCATCAGGTCAAGCGCATGGTCGCAGCCGTAGGGAACCGAGTGGAGGGATTGCATCGCTGGCGCATTGGTGGGCTGGCGTTGCCCCTGGATCTTGCCCCTGGCGAATGGCGCTGGCTGTCGGCCGAAGACCATGCGTTGCTGGGCTTGGCATAG
PROTEIN sequence
Length: 249
MQLQDILYSQGFGTRRVCAGLVQQGWVEISGLGEKGAPVICTDATQEFVPEGLHLRVQGVDWLYQAKAYLMLHKPAGTECSQKPSAYPSIYTLLPSPLRQRPSKSAVQGVQAVGRLDQDTTGLLLMSDDGQFIHRMSSPKKHVPKVYRVYAKHVLTAEQVGRLLSGVVLDDDPHPVKAADCVRVDDHVMDLTLTEGKYHQVKRMVAAVGNRVEGLHRWRIGGLALPLDLAPGEWRWLSAEDHALLGLA*