ggKbase home page

scnpilot_p_inoc_scaffold_2022_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(2031..3875)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; B similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 611.0
  • Bit_score: 1168
  • Evalue 0.0
Phosphomethylpyrimidine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=THIC_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 611.0
  • Bit_score: 1168
  • Evalue 0.0
  • rbh
phosphomethylpyrimidine synthase-like similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 600.0
  • Bit_score: 1173
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGAACGCTCCCGACTCGTTTTCCCACCTCCTGGCCCGCACGCGCGAGCCTTTCCCGGCCTCGGCCAAAAGCTACCTGACAGGCTCGCGCGGCGACCTGCGCGTGCCGGTGCGCGACATCCGCCTGACCAATGGCGAGGTGGTCAGCGTCTATGACACCTCGGGCCCCTACACCGATCCGGTCGCCGCCATCGACGTGCGCCAGGGGCTGGCCAGCGTGCGCGGCGCGTGGATCGCCGAGCGCGCCGACACCGAAAGCTACGAGGGCCGGGTGCGCAGGGCGCTCGACGACGGCCAGAAGGCCGAGGACGGCGACCGTCTGGCCCAGTTGCGCGCCGAGGCCGCCGCGCTGCAGCGCCAGCCGCTGCGCGCCAAGGCGGGCACGAACGTGACGCAGATGCACTACGCGAAGAAGGGCATCGTCACCCCCGAGATGGAGTACGTGGCGCTGCGCGAGAACGGCCGGCGCGAATGGATGCAGCAGTACCTGCAGGACGCGGCGCGCGAGCAGCGCCTGGCCGGCAACCCGCTGGGCGCGAGCATTCCCAAGATCATCACGCCCGAGTTCGTGCGCGACGAAGTGGCGCGCGGCCGCGCCATCATCCCGGCCAACATCAATCACCCCGAAGTCGAGCCCATGGCCATCGGGCGCAACTTCAAGGTAAAGATCAACGCCAACATCGGCAACTCGGCCGTCACCTCGAGCATCGAGGAAGAGGTGGAAAAGCTGGTCTGGGCCATCCGCTGGGGCGCGGACAACGTGATGGACCTTTCGACCGGCAAGGCCATCCACACCACGCGCGACTGGATCGTGCGCAACTCGCCCGTGCCCATCGGTACCGTGCCCATCTACCAGGCGCTGGAGAAGGTGGGCGGCATCGCCGAGGACCTGACCTGGGCCATCTTCCGCGACACGCTCATCGAGCAGGCCGAGCAGGGCGTGGACTACTTCACCATCCACGCGGGCGTGCGCCTGGCCTACATCCAGCTCACGGCGCAGCGGCGCACCGGCATCGTCTCGCGCGGTGGCTCCATCATGGCCAAGTGGTGCATGGCGCACCACCGCGAGAGCTTTTTGTACGAGCACTTCGAGGACATCTGCGACATCATGAAGGCGTACGACGTGAGCTTCAGCCTGGGCGACGGCCTGCGCCCCGGCTGCGCGAGCGACGCCAACGACGAGGCCCAGTTCGCCGAGCTGCGCACCCTGGGCGAACTCACGCAGACCGCCTGGAAGCACGACGTGCAGACCATGATCGAAGGCCCCGGCCACGTGCCCCTGCACATGATCCAGGCCAACATGACGGAGCAGCTCAAGCACTGCCACGAGGCGCCGTTCTACACCCTCGGGCCGCTGACCATCGACATCGCGCCGGGCTACGACCATATCGCCAGCGCCATCGGCGCCGCCATGATCGGCTGGATGGGCACGGCCATGCTGTGCTACGTGACGCCCAAGGAACACCTGGGCTTGCCCGACCGCGACGACGTCAAGCAGGGCATCATCGCCTACAAGATCGCCGCGCATGCCGCCGACGTGGCCAAGGGCCACCCGGGCGCCCGCGCGCGCGACGACGCGCTGAGCCAGGCGCGCTTCGACTTCCGCTGGCAGGACCAGTTCAACCTGGGCCTCGACCCCGACACCGCCAAGGAATACCACGACGAAACCCTGCCCAAGGACAGCGCCAAGGTGGCGCATTTCTGCTCCATGTGCGGCCCCAAGTTCTGCTCGATGAAGATCACGCAGGAGGTGCGTGAATTCGCCCAGCAGGGCCTGCAGCACAAGGCCGAGGAGTTTCGCGGCGCGGGCGGCGAGTTGTACGTGCCCATCCAGCCGGTGGCCTGA
PROTEIN sequence
Length: 615
MNAPDSFSHLLARTREPFPASAKSYLTGSRGDLRVPVRDIRLTNGEVVSVYDTSGPYTDPVAAIDVRQGLASVRGAWIAERADTESYEGRVRRALDDGQKAEDGDRLAQLRAEAAALQRQPLRAKAGTNVTQMHYAKKGIVTPEMEYVALRENGRREWMQQYLQDAAREQRLAGNPLGASIPKIITPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFKVKINANIGNSAVTSSIEEEVEKLVWAIRWGADNVMDLSTGKAIHTTRDWIVRNSPVPIGTVPIYQALEKVGGIAEDLTWAIFRDTLIEQAEQGVDYFTIHAGVRLAYIQLTAQRRTGIVSRGGSIMAKWCMAHHRESFLYEHFEDICDIMKAYDVSFSLGDGLRPGCASDANDEAQFAELRTLGELTQTAWKHDVQTMIEGPGHVPLHMIQANMTEQLKHCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWMGTAMLCYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADVAKGHPGARARDDALSQARFDFRWQDQFNLGLDPDTAKEYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREFAQQGLQHKAEEFRGAGGELYVPIQPVA*