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scnpilot_p_inoc_scaffold_1000_curated_7

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(5459..5743)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIJ2_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 178
  • Evalue 3.20e-42
conjugal transfer protein trbc; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 178
  • Evalue 1.00e-42
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EIZ02996.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 178
  • Evalue 4.50e-42

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Taxonomy

Ralstonia sp. PBA → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGCTCGCGGCCTTCATGCTGCTGCTTGCAGGAACCGCCCAGGCTGCGGGTTCCTCGATGCCCTGGGAAGGGCCGCTGCAATCCATCCTGGAGTCGATCCAGGGGCCGGTGGCCCGGATCATCGCGGTCATCATCATCATCGCCACGGGCTTGGCGCTGGCCTTCGGCGATACCTCGGGCGGCTTCCGCAAGCTGATCCAGATCGTCTTCGGGCTGTCGATCGCGTTTGCCGCGTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCGGGCGGGGCGGTCGTATGA
PROTEIN sequence
Length: 95
MLAAFMLLLAGTAQAAGSSMPWEGPLQSILESIQGPVARIIAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*