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scnpilot_p_inoc_scaffold_1000_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(9892..10785)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT37_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 577
  • Evalue 7.50e-162
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 577
  • Evalue 2.40e-162
LysR substrate-binding protein {ECO:0000313|EMBL:ADU98004.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 577
  • Evalue 1.10e-161

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGAATTGCGTCACCTCCGGTACTTTCTGGCCGTTGCCGAAGAGCTTCACTTCGCCCGCGCTGCGGAGCGGTTGCATATCGAACAGTCACCACTGTCGCGCGCCATCAGGGAATTGGAAGAGGAATTGGGCGCGCAACTGTTCGTGCGTACCAGCCGCAGCACGCGCCTGACGCTGGCGGGCAAGCTGCTGATGGAGAACGCGCCTCGCGTGCTGCTGGCGCTGGACCAGGCGCGTGAGAGCGTGAAGGCGGCAGCCAATGGCTTTCACGGCCGGTTGCGCGTGGCGCTGTCCGACGGCATCACCCCCTCGCGCCTGCCGGCGCTGCTGGCGCGCTGCCGCGAGGAAGACCCGGAGATCGAGATCCGCCTGTTCGAGGTGCCGCTGGCCCAGCAACTCAGCGGCCTGCGTGACGATCTATACGACGCGGGCTTCTCGATGGCCGACGAGGTGGGCGACGGCATCATCATCGAACCCGCCTGGGAGGACGAGCTGATGGTGGCCATGCCCGCGCGCCATGAACTACTGGCCCACAGGCGGGTGCCGCTGGATGAAGTGCTGCAACATCCCCTGGTGTTGGGCGACCCGGCAGTTTGCGAAGGCCATGCCAAGCAGATCGACCGCATCCTGCGCAAGCAGGACCGAGAGCCCTTGATCGAACAGTACGTCGCCACGTTCGACGTGATGATGACTTTCGTGTCGGCCGGCCTGGCGCTGGGGCTCGCAGGCGCCGCGCACATCGCTTCCAGCCGCGAGCCGGGCGTGGTAGGCCGACCGCTCGCGGGAAAGTCGCCCATGCTCACCACCTATCTGCTGCGCCGCGACGCCGAGCCGTCGCAGGCGCTGGCCCGCTTCATCGAGCGGGTCGAAGCCCTGGGGCCGGGAGACGCTTAG
PROTEIN sequence
Length: 298
MELRHLRYFLAVAEELHFARAAERLHIEQSPLSRAIRELEEELGAQLFVRTSRSTRLTLAGKLLMENAPRVLLALDQARESVKAAANGFHGRLRVALSDGITPSRLPALLARCREEDPEIEIRLFEVPLAQQLSGLRDDLYDAGFSMADEVGDGIIIEPAWEDELMVAMPARHELLAHRRVPLDEVLQHPLVLGDPAVCEGHAKQIDRILRKQDREPLIEQYVATFDVMMTFVSAGLALGLAGAAHIASSREPGVVGRPLAGKSPMLTTYLLRRDAEPSQALARFIERVEALGPGDA*