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scnpilot_p_inoc_scaffold_1000_curated_42

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 43975..44265

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Ralstonia sp. PBA RepID=I9W3F2_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 3.30e-42
Transcriptional regulator {ECO:0000313|EMBL:GAO20599.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 3.50e-42
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 94.0
  • Bit_score: 170
  • Evalue 3.70e-40

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGCAGAAGCGATCCATCCAGCGCGACCGACCGGCCGGCGCCACCACCTACGATGCCGAGTTGGCGCAAGCCTTCGGCGCGGCGGTGCGCGCGCTGCGGACGGAGCGCGGCATCGCGCAGGAGTCGCTCGCGCACCTCGCCGGCATCGAGCGTTCGCACATGGGCAAGGTCGAGCGCGGCGAGCACATGCCCACGCTGGCGATCATCTTCAAGATCGCCGGCGCGCTCGAATGCAGCACGGCAGTGCTGATGAGCAAGGCCGAAGAACTGCTGGCGGTAGCCCAGGCGTAG
PROTEIN sequence
Length: 97
MQKRSIQRDRPAGATTYDAELAQAFGAAVRALRTERGIAQESLAHLAGIERSHMGKVERGEHMPTLAIIFKIAGALECSTAVLMSKAEELLAVAQA*