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scnpilot_p_inoc_scaffold_2534_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 2455..2745

Top 3 Functional Annotations

Value Algorithm Source
FmdB family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237783A similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 108.0
  • Bit_score: 153
  • Evalue 1.10e-34
FmdB family transcriptional regulator {ECO:0000313|EMBL:KJA09966.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 96.0
  • Bit_score: 163
  • Evalue 2.00e-37
FmdB family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 96.0
  • Bit_score: 151
  • Evalue 1.80e-34

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGCCTATCTATGCCTACAAATGCGGCGCCTGTGGCCATGCCAAGGATGTGCTGCAAAAAATCTCCGACGCTCCGCTGACGCAGTGTCCCGCCTGCGGCGCCGAGGCGTTCTCCAAGCAGATCACGGCCGCCGGCTTCCAGCTCAAGGGCTCGGGCTGGTACGTCACGGACTTCCGTGGCGGCAGCGGCAGCAGTGCCCCCGCGACAGGCGCCAAGAGCGAGGAGGCCGCGGCGCCCGCGGCAGCACCGGCCGCCTGCGCATCCTGCCCCGCTGCCTCGAAGGCAGATTGA
PROTEIN sequence
Length: 97
MPIYAYKCGACGHAKDVLQKISDAPLTQCPACGAEAFSKQITAAGFQLKGSGWYVTDFRGGSGSSAPATGAKSEEAAAPAAAPAACASCPAASKAD*