ggKbase home page

scnpilot_p_inoc_scaffold_9530_curated_2

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(1361..2014)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 217.0
  • Bit_score: 372
  • Evalue 3.80e-100
ribosomal RNA methyltransferase rrmj/ftsj; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 217.0
  • Bit_score: 370
  • Evalue 4.20e-100
UPI0003D3DEF3 related cluster n=1 Tax=unknown RepID=UPI0003D3DEF3 similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 217.0
  • Bit_score: 372
  • Evalue 2.70e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAAAGTAAAGACCAAGAGCAAGAAGGTCAACAAGGCGTGGCTGAACCAGCACGTCAACGACCCCTATGTGAAAGCCGCGCAGAAGGACGGCTACCGCGCGCGCGCGGCCTACAAGCTCAAGGAGATCGACGAGCAGCTCGGGCTGATCCGACCGGGTGACACGGTGGTCGATCTGGGCTGTGCGCCTGGCGCCTGGAGCCAGTATCTGCGCCGGCGCCTGTCGCCGGGGGGGGCCGCGGCCGGGCAGCTCAACGGCACCATCATCGGGCTGGACCTGCTGCCCATGGAGCCGATCGAAGGGGTGGCCTACATCCAGGGCGATTTTCGCGAGGACAGCGTGCTGGCCCAGCTCCAGCAGGCGCTGCAAGGCCGGCTGGCCGATGCCGTGGTGTCCGACATGGCACCCAATCTCTCGGGCGTGGATTCGGTCGACGCGGCGCGCATCGCCCACCTGATCGAGCTGGCCGTCGATTTCGCGCAGCACCACATGAAGCCCGAGGGCGCGCTGGTGGTCAAGCTGTTCCATGGCAGCGGCTATGCGCAGCTGGTGCAACTGTTCAAGGACCGTTTCAAGGTGGTCAAGCCGATCAAGCCCAAGGCCTCGCGCGACAGATCTTCGGAAACTTTTCTGGTCGGTATCGGCCTCAAATAG
PROTEIN sequence
Length: 218
MKVKTKSKKVNKAWLNQHVNDPYVKAAQKDGYRARAAYKLKEIDEQLGLIRPGDTVVDLGCAPGAWSQYLRRRLSPGGAAAGQLNGTIIGLDLLPMEPIEGVAYIQGDFREDSVLAQLQQALQGRLADAVVSDMAPNLSGVDSVDAARIAHLIELAVDFAQHHMKPEGALVVKLFHGSGYAQLVQLFKDRFKVVKPIKPKASRDRSSETFLVGIGLK*